reprophylo analysis from Sat Oct 18 22:38:02 2014
Data
Species Representation In Sequence Data
species cytb coiii nad4
Conolophus marthae 16 0 0
Cyclura nubila 1 0 1
Cyclura cychlura figginsi 0 0 2
Cyclura cychlura cychlura 0 0 2
Sauromalus varius 4 0 1
Ctenosaura bakeri 4 0 13
Cyclura carinata 0 0 2
Ctenosaura hemilopha macrolopha 10 10 0
Ctenosaura hemilopha 8 6 6
Ctenosaura oaxacana 0 0 16
Ctenosaura melanosterna 9 0 10
Iguana iguana 2 0 25
Ctenosaura quinquecarinata 0 0 11
Ctenosaura flavidorsalis 0 0 43
Brachylophus fasciatus 8 0 1
Ctenosaura similis x bakeri 0 0 1
Ctenosaura hemilopha x Ctenosaura pectinata 0 0 1
Cyclura cychlura inornata 0 0 1
Cyclura ricordi 0 0 3
Cyclura rileyi 0 0 1
Cyclura carinata carinata 0 0 2
Cyclura cornuta stejnegeri 0 0 2
Ctenosaura hemilopha conspicuosa 7 7 0
Cyclura cornuta cornuta 0 0 1
Iguana delicatissima 0 0 2
Ctenosaura pectinata 11 11 92
Brachylophus vitiensis 12 0 0
Ctenosaura oedirhina 3 0 10
Sauromalus australis 1 0 1
Ctenosaura similis 3 0 21
Cyclura pinguis 0 0 1
Sauromalus hispidus 6 0 0
Cyclura collei 0 0 1
Cyclura cornuta 1 0 0
Cyclura nubila nubila 0 0 9
Dipsosaurus dorsalis 2 0 14
Amblyrhynchus cristatus 12 0 2
Conolophus subcristatus 130 0 1
Cyclura nubila caymanensis 0 0 2
Ctenosaura hemilopha nolascensis 8 8 0
Cyclura nubila lewisi 0 0 3
Sauromalus klauberi 0 0 1
Conolophus pallidus 7 0 1
Sauromalus ater 23 5 2
Ctenosaura acanthura 0 0 2
Ctenosaura palearis 3 0 7
Distribution of sequence lengths
Distribution of sequence statistic "GC_content"
Distribution of sequence statistic "nuc_degen_prop"
Distribution of sequence statistic "prot_degen_prop"
Content Of Concatenation "Strict"
Rules for "strict":
OTUs must have the loci: coiii, cytb,
OTUs must have at least one of each group:
cytb coiii
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ROM_38029 Ctenosaura hemilopha nolascensisHQ141271.1_f0 HQ141223.1_f0
ROM_38028 Ctenosaura hemilopha nolascensisHQ141240.1_f0 HQ141192.1_f0
ROM_38023 Ctenosaura hemilopha macrolopha HQ141238.1_f0 HQ141190.1_f0
ROM_38022 Ctenosaura hemilopha macrolopha HQ141237.1_f0 HQ141189.1_f0
ROM_38021 Ctenosaura hemilopha macrolopha HQ141236.1_f0 HQ141188.1_f0
RWM_2280 Ctenosaura hemilopha HQ141251.1_f0 HQ141203.1_f0
KP-22a Sauromalus ater HQ141242.1_f0 HQ141194.1_f0
KP-22b Sauromalus ater HQ141243.1_f0 HQ141195.1_f0
ROM_26795 Ctenosaura hemilopha HQ141246.1_f0 HQ141198.1_f0
ROM_38038 Ctenosaura hemilopha macrolopha HQ141232.1_f0 HQ141184.1_f0
ROM_38039 Ctenosaura hemilopha macrolopha HQ141233.1_f0 HQ141185.1_f0
ROM_38034 Ctenosaura hemilopha nolascensisHQ141276.1_f0 HQ141228.1_f0
ROM_38035 Ctenosaura hemilopha nolascensisHQ141277.1_f0 HQ141229.1_f0
ROM_38037 Ctenosaura hemilopha macrolopha HQ141231.1_f0 HQ141183.1_f0
ROM_38030 Ctenosaura hemilopha nolascensisHQ141272.1_f0 HQ141224.1_f0
ROM_38031 Ctenosaura hemilopha nolascensisHQ141273.1_f0 HQ141225.1_f0
ROM_38032 Ctenosaura hemilopha nolascensisHQ141274.1_f0 HQ141226.1_f0
ROM_38033 Ctenosaura hemilopha nolascensisHQ141275.1_f0 HQ141227.1_f0
RWM_879 Ctenosaura hemilopha HQ141250.1_f0 HQ141202.1_f0
ROM_38024 Ctenosaura hemilopha macrolopha HQ141239.1_f0 HQ141191.1_f0
KP-19 Sauromalus ater AF020250.1_f0 HQ141197.1_f0
RWM_623 Ctenosaura hemilopha HQ141248.1_f0 HQ141200.1_f0
ROM_38004 Ctenosaura hemilopha macrolopha HQ141267.1_f0 HQ141219.1_f0
ROM_38001 Ctenosaura pectinata HQ141269.1_f0 HQ141221.1_f0
ROM_38003 Ctenosaura hemilopha macrolopha HQ141268.1_f0 HQ141220.1_f0
ROM_38002 Ctenosaura pectinata HQ141270.1_f0 HQ141222.1_f0
ROM_38041 Ctenosaura pectinata HQ141259.1_f0 HQ141211.1_f0
ROM_38040 Ctenosaura pectinata HQ141234.1_f0 HQ141186.1_f0
ROM_38043 Ctenosaura pectinata HQ141261.1_f0 HQ141213.1_f0
ROM_38042 Ctenosaura pectinata HQ141260.1_f0 HQ141212.1_f0
ROM_38045 Ctenosaura pectinata HQ141263.1_f0 HQ141215.1_f0
ROM_38044 Ctenosaura pectinata HQ141262.1_f0 HQ141214.1_f0
ROM_38047 Ctenosaura pectinata HQ141265.1_f0 HQ141217.1_f0
ROM_38046 Ctenosaura pectinata HQ141264.1_f0 HQ141216.1_f0
JRO_645 Ctenosaura hemilopha macrolopha HQ141235.1_f0 HQ141187.1_f0
KP-21 Sauromalus ater HQ141244.1_f0 HQ141196.1_f0
KP-20 Sauromalus ater HQ141241.1_f0 HQ141193.1_f0
RWM_2282 Ctenosaura hemilopha HQ141247.1_f0 HQ141199.1_f0
KPEC103 Ctenosaura hemilopha conspicuosa HQ141253.1_f0 HQ141205.1_f0
KPEC102 Ctenosaura hemilopha conspicuosa HQ141252.1_f0 HQ141204.1_f0
ROM_38014 Ctenosaura hemilopha conspicuosaHQ141257.1_f0 HQ141209.1_f0
ROM_38015 Ctenosaura hemilopha conspicuosaHQ141258.1_f0 HQ141210.1_f0
ROM_38012 Ctenosaura hemilopha conspicuosaHQ141255.1_f0 HQ141207.1_f0
ROM_38013 Ctenosaura hemilopha conspicuosaHQ141256.1_f0 HQ141208.1_f0
ROM_38011 Ctenosaura hemilopha conspicuosaHQ141254.1_f0 HQ141206.1_f0
ROM_38050 Ctenosaura pectinata HQ141266.1_f0 HQ141218.1_f0
RWM_631 Ctenosaura hemilopha HQ141249.1_f0 HQ141201.1_f0
Methods
Seuqence Alignment Method "MafftLinsi", method ID: 539651413667746.84
Included loci :cytb, coiii, nad4,
Total execution time: 20.365694046 sec'
Performed on: Sat Oct 18 22:29:06 2014
Platform: Linux-3.13.0-37-generic-x86_64-with-Ubuntu-14.04-trusty
Processor: x86_64
Python build: defaultMar 22 2014 22:59:56
Python compiler: GCC 4.8.2
Python implementation: CPython
Python version: 2.7.6
ete2 version: 2.2rev1056
biopython version: 1.64
dendropy version: 3.12.0
cloud version: 2.8.5
User: amir-TECRA-W50-A
Program and version: Get mafft to spit version to stdout
Command lines:
Alignment "cytb":
mafft --auto 539651413667746.84_cytb.fasta
Alignment "coiii":
mafft --auto 539651413667746.84_coiii.fasta
Alignment "nad4":
mafft --auto 539651413667746.84_nad4.fasta
Trimal alignment trimming Method "gappyout", method ID: 502851413667777.38
Included alignments :coiii@MafftLinsi, nad4@MafftLinsi, cytb@MafftLinsi,
Total execution time: 0.100402116776 sec'
Performed on: Sat Oct 18 22:29:37 2014
Platform: Linux-3.13.0-37-generic-x86_64-with-Ubuntu-14.04-trusty
Processor: x86_64
Python build: defaultMar 22 2014 22:59:56
Python compiler: GCC 4.8.2
Python implementation: CPython
Python version: 2.7.6
ete2 version: 2.2rev1056
biopython version: 1.64
dendropy version: 3.12.0
cloud version: 2.8.5
User: amir-TECRA-W50-A
Program and version: trimal: trimAl 1.2rev59
Command lines:
Alignment "nad4@MafftLinsi@gappyout":
trimal -in 502851413667777.38_nad4@MafftLinsi.fasta -gappyout
Alignment "cytb@MafftLinsi@gappyout":
trimal -in 502851413667777.38_cytb@MafftLinsi.fasta -gappyout
Alignment "coiii@MafftLinsi@gappyout":
trimal -in 502851413667777.38_coiii@MafftLinsi.fasta -gappyout
Raxml Tree Reconstruction Method "fD_fb", method ID: 571221413667810.4
Included alignments :nad4@MafftLinsi@gappyout, cytb@MafftLinsi@gappyout, coiii@MafftLinsi@gappyout, strict,
Total execution time: 175.643320084 sec'
Performed on: Sat Oct 18 22:30:10 2014
Platform: Linux-3.13.0-37-generic-x86_64-with-Ubuntu-14.04-trusty
Processor: x86_64
Python build: defaultMar 22 2014 22:59:56
Python compiler: GCC 4.8.2
Python implementation: CPython
Python version: 2.7.6
ete2 version: 2.2rev1056
biopython version: 1.64
dendropy version: 3.12.0
cloud version: 2.8.5
User: amir-TECRA-W50-A
Program and version: raxmlHPC-PTHREADS-SSE3: This is RAxML version 8.0.12 released by Alexandros Stamatakis on March 6 2014.
Command lines:
Alignment "nad4@MafftLinsi@gappyout":
raxmlHPC-PTHREADS-SSE3 -f D -m GTRGAMMA -n 571221413667810.4_nad4@MafftLinsi@gappyout0 -p 187 -s 571221413667810.4_nad4@MafftLinsi@gappyout.fasta -T 5 -N 1
raxmlHPC-PTHREADS-SSE3 -f b -m GTRGAMMA -n 571221413667810.4_nad4@MafftLinsi@gappyout1 -p 736 -s 571221413667810.4_nad4@MafftLinsi@gappyout.fasta -t RAxML_bestTree.571221413667810.4_nad4@MafftLinsi@gappyout0 -T 5 -z RAxML_rellBootstrap.571221413667810.4_nad4@MafftLinsi@gappyout0
Alignment "cytb@MafftLinsi@gappyout":
raxmlHPC-PTHREADS-SSE3 -f D -m GTRGAMMA -n 571221413667810.4_cytb@MafftLinsi@gappyout0 -p 865 -s 571221413667810.4_cytb@MafftLinsi@gappyout.fasta -T 5 -N 1
raxmlHPC-PTHREADS-SSE3 -f b -m GTRGAMMA -n 571221413667810.4_cytb@MafftLinsi@gappyout1 -p 581 -s 571221413667810.4_cytb@MafftLinsi@gappyout.fasta -t RAxML_bestTree.571221413667810.4_cytb@MafftLinsi@gappyout0 -T 5 -z RAxML_rellBootstrap.571221413667810.4_cytb@MafftLinsi@gappyout0
Alignment "coiii@MafftLinsi@gappyout":
raxmlHPC-PTHREADS-SSE3 -f D -m GTRGAMMA -n 571221413667810.4_coiii@MafftLinsi@gappyout0 -p 12 -s 571221413667810.4_coiii@MafftLinsi@gappyout.fasta -T 5 -N 1
raxmlHPC-PTHREADS-SSE3 -f b -m GTRGAMMA -n 571221413667810.4_coiii@MafftLinsi@gappyout1 -p 884 -s 571221413667810.4_coiii@MafftLinsi@gappyout.fasta -t RAxML_bestTree.571221413667810.4_coiii@MafftLinsi@gappyout0 -T 5 -z RAxML_rellBootstrap.571221413667810.4_coiii@MafftLinsi@gappyout0
Alignment "strict":
raxmlHPC-PTHREADS-SSE3 -f D -m PROTGAMMAJTT -n 571221413667810.4_strict0 -q 571221413667810.4_strict_partfile -p 801 -s 571221413667810.4_strict.fasta -T 5 -N 1
raxmlHPC-PTHREADS-SSE3 -f b -m PROTGAMMAJTT -n 571221413667810.4_strict1 -q 571221413667810.4_strict_partfile -p 420 -s 571221413667810.4_strict.fasta -t RAxML_bestTree.571221413667810.4_strict0 -T 5 -z RAxML_rellBootstrap.571221413667810.4_strict0
Alignment statistics before trimming
Trimal's Residue Similarity Score (-scc)
Trimal's column gap gcore (-sgc)
Alignment statistics after trimming
"Trimal's Residue Similarity Score (-scc)
Trimal's column gap gcore (-sgc)
Robinson-Foulds distances
Legend
# LOCUS ALIGNMENT METHOD TRIMMING METHOD TREE METHOD
0 strict mixed mixed fD_fb
1 nad4 MafftLinsi gappyout fD_fb
2 cytb MafftLinsi gappyout fD_fb
3 coiii MafftLinsi gappyout fD_fb
Trees
strict
Alignment method: mixed
Trimming method: mixed
Tree method: fD_fb
Tree Method ID: 571221413667810.4_strict
newick format
((KP-19:0.00470337,(KP-20:0.00256755,(KP-22a:0.00674818,(KP-22b:4.50384e-06,KP-21:0.000716592)100:0.00214416)100:0.00119377)100:0.0357888)100:0.173929,((ROM_38040:0.00382965,((ROM_38050:0.00295412,(ROM_38041:0.0045509,(ROM_38001:4.50384e-06,ROM_38002:4.50384e-06)100:0.00526786)100:0.00373066)100:4.50384e-06,((ROM_38042:0.000729157,ROM_38043:4.50384e-06)100:0.00220067,((ROM_38046:0.000717889,ROM_38045:0.0029756)100:0.00297237,(ROM_38047:4.50384e-06,ROM_38044:0.000729889)100:0.00220049)0:4.50384e-06)0:0.00222669)0:0.00371342)100:0.164683,(((ROM_38004:0.00146798,((ROM_38029:4.50384e-06,ROM_38031:4.50384e-06)100:4.50384e-06,(ROM_38030:4.50384e-06,(ROM_38034:4.50384e-06,ROM_38035:4.50384e-06)100:4.50384e-06)100:4.50384e-06)100:0.00217667)100:0.0050497,(KPEC103:0.000725036,(ROM_38013:4.50384e-06,(ROM_38014:0.000726095,((ROM_38015:4.50384e-06,ROM_38012:4.50384e-06)100:0.000723053,(KPEC102:4.50384e-06,ROM_38011:4.50384e-06)98:0.00072341)88:4.50384e-06)1:4.50384e-06)66:4.50384e-06)98:0.000127762)98:0.0269772,((ROM_38028:4.50384e-06,(ROM_38033:0.000727899,ROM_38032:4.50384e-06)100:0.000745705)100:0.00614109,((RWM_2282:0.000726231,(RWM_2280:4.50384e-06,(ROM_26795:4.50384e-06,(RWM_631:4.50384e-06,(RWM_623:4.50384e-06,RWM_879:4.50384e-06)0:4.50384e-06)0:4.50384e-06)0:4.50384e-06)69:4.50384e-06)69:0.0017993,(ROM_38038:4.50384e-06,((ROM_38024:4.50384e-06,(ROM_38021:4.50384e-06,(JRO_645:0.000725003,ROM_38023:0.000732431)0:4.50384e-06)0:4.50384e-06)0:4.50384e-06,((ROM_38022:4.50384e-06,ROM_38039:0.00220432)83:0.000726536,(ROM_38037:0.000370886,ROM_38003:0.00145256)0:0.000357554)0:4.50384e-06)82:4.50384e-06)100:0.00560499)68:0.00503257)69:0.0154211)96:0.0543856)100:0.173929);
nhx format
(ROM_38029:4.50384e-06[&&NHX:source_specimen_voucher=ROM 38029:source_sub_species=nolascensis:tree_method_id=571221413667810.4_strict:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:dist=4.50383598208e-06:annotation_organism=Ctenosaura hemilopha nolascensis:prot_degen_prop=0.0046728972:source_isolate=Ch30:support=1.0:codon_start=2:nuc_degen_prop=0.0015503876:source_organelle=mitochondrion:feature_id=HQ141223.1_f0:db_xref=GI_325311002:record_id=HQ141223.1:GC_content=44.0310077519:protein_id=ADZ11145.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha nolascensis:OTUs=ROM_38029:annotation_data_file_division=VRT:translation=IXALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325311001:source_db_xref=taxon_993012:gene=COIII:name=ROM_38029:annotation_accessions=_'HQ141223'_:source_feature_id=HQ141223.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha nolascensis:genus=Ctenosaura:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Isla San Pedro Nolasco:annotation_sequence_version=1],(((((((RWM_2282:0.000726231[&&NHX:source_specimen_voucher=RWM 2282:tree_method_id=571221413667810.4_strict:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:dist=0.000726230757651:annotation_organism=Ctenosaura hemilopha:prot_degen_prop=0:source_isolate=Ch03:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141199.1_f0:db_xref=GI_325310954:record_id=HQ141199.1:GC_content=45.2713178295:protein_id=ADZ11121.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha:OTUs=RWM_2282:annotation_data_file_division=VRT:translation=IAALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTTLQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTSHHFGF:annotation_keywords=_''_:annotation_gi=325310953:source_db_xref=taxon_51210:gene=COIII:name=RWM_2282:annotation_accessions=_'HQ141199'_:source_feature_id=HQ141199.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha:genus=Ctenosaura:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Baja California Sur_ San Bartolo:annotation_sequence_version=1],(((RWM_631:4.50384e-06[&&NHX:source_specimen_voucher=RWM 631:tree_method_id=571221413667810.4_strict:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:dist=4.50383598208e-06:annotation_organism=Ctenosaura hemilopha:prot_degen_prop=0:source_isolate=Ch05:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141201.1_f0:db_xref=GI_325310958:record_id=HQ141201.1:GC_content=45.2713178295:protein_id=ADZ11123.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha:OTUs=RWM_631:annotation_data_file_division=VRT:translation=IAALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTTLQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTSHHFGF:annotation_keywords=_''_:annotation_gi=325310957:source_db_xref=taxon_51210:gene=COIII:name=RWM_631:annotation_accessions=_'HQ141201'_:source_feature_id=HQ141201.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha:genus=Ctenosaura:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Baja California Sur_ Hwy 1_ 6.9 miles S of Todos Santos turnoff:annotation_sequence_version=1],(RWM_623:4.50384e-06[&&NHX:source_specimen_voucher=RWM 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III:source_organism=Ctenosaura hemilopha nolascensis:OTUs=ROM_38035:annotation_data_file_division=VRT:translation=IXALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325311013:source_db_xref=taxon_993012:gene=COIII:name=ROM_38035:annotation_accessions=_'HQ141229'_:source_feature_id=HQ141229.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha nolascensis:genus=Ctenosaura:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Isla San Pedro Nolasco:annotation_sequence_version=1])100:4.50384e-06[&&NHX:support=100.0:dist=4.50383598208e-06:name=NoName:tree_method_id=571221413667810.4_strict],ROM_38030:4.50384e-06[&&NHX:source_specimen_voucher=ROM 38030:source_sub_species=nolascensis:tree_method_id=571221413667810.4_strict:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:dist=4.50383598208e-06:annotation_organism=Ctenosaura hemilopha nolascensis:prot_degen_prop=0:source_isolate=Ch31:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141224.1_f0:db_xref=GI_325311004:record_id=HQ141224.1:GC_content=44.1860465116:protein_id=ADZ11146.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha nolascensis:OTUs=ROM_38030:annotation_data_file_division=VRT:translation=ITALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325311003:source_db_xref=taxon_993012:gene=COIII:name=ROM_38030:annotation_accessions=_'HQ141224'_:source_feature_id=HQ141224.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha nolascensis:genus=Ctenosaura:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Isla San Pedro Nolasco:annotation_sequence_version=1])100:4.50384e-06[&&NHX:support=100.0:dist=4.50383598208e-06:name=NoName:tree_method_id=571221413667810.4_strict])100:4.50384e-06[&&NHX:support=100.0:dist=4.50383598208e-06:name=NoName:tree_method_id=571221413667810.4_strict],ROM_38031:4.50384e-06[&&NHX:source_specimen_voucher=ROM 38031:source_sub_species=nolascensis:tree_method_id=571221413667810.4_strict:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:dist=4.50383598208e-06:annotation_organism=Ctenosaura hemilopha nolascensis:prot_degen_prop=0:source_isolate=Ch32:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141225.1_f0:db_xref=GI_325311006:record_id=HQ141225.1:GC_content=44.1860465116:protein_id=ADZ11147.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha nolascensis:OTUs=ROM_38031:annotation_data_file_division=VRT:translation=ITALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325311005:source_db_xref=taxon_993012:gene=COIII:name=ROM_38031:annotation_accessions=_'HQ141225'_:source_feature_id=HQ141225.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha nolascensis:genus=Ctenosaura:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Isla San Pedro Nolasco:annotation_sequence_version=1]);
nad4
Alignment method: MafftLinsi
Trimming method: gappyout
Tree method: fD_fb
Tree Method ID: 571221413667810.4_nad4@MafftLinsi@gappyout
newick format
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nhx format
((KC433324.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=JOS146:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433324.1_f0:db_xref=GI_499130117:source_lat_lon=33.9155 N 115.8850 W:record_id=KC433324.1:GC_content=39.7476340694:protein_id=AGL75379.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=JOS146:annotation_data_file_division=VRT:translation=TLTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130116:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433324.1_f0:annotation_accessions=_'KC433324'_:source_feature_id=KC433324.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1],KC433326.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=JOS655:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433326.1_f0:db_xref=GI_499130121:source_lat_lon=33.9474 N 115.9810 W:record_id=KC433326.1:GC_content=39.7476340694:protein_id=AGL75381.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=JOS655:annotation_data_file_division=VRT:translation=TLTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130120:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433326.1_f0:annotation_accessions=_'KC433326'_:source_feature_id=KC433326.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1])100:0.0106158[&&NHX:support=100.0:dist=0.0106158462129:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],((((KC433329.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=MVZ_230560:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433329.1_f0:db_xref=GI_499130127:source_lat_lon=33.8283 N 116.5334 W:record_id=KC433329.1:GC_content=39.5899053628:protein_id=AGL75384.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=MVZ_230560:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130126:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433329.1_f0:annotation_accessions=_'KC433329'_:source_feature_id=KC433329.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1],KC433323.1_f0:0.00170904[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00170903874224:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=CAS_HERP_208708:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433323.1_f0:db_xref=GI_499130115:source_lat_lon=33.8482 N 116.4237 W:record_id=KC433323.1:GC_content=39.7476340694:protein_id=AGL75378.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=CAS_HERP_208708:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130114:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433323.1_f0:annotation_accessions=_'KC433323'_:source_feature_id=KC433323.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1])100:0.0017146[&&NHX:support=100.0:dist=0.00171460052269:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],((KC433321.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=CSDD030608:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433321.1_f0:db_xref=GI_499130111:source_lat_lon=34.0508 N 113.0732 W:record_id=KC433321.1:GC_content=39.4321766562:protein_id=AGL75376.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130110:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433321.1_f0:annotation_accessions=_'KC433321'_:source_feature_id=KC433321.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1],KC433322.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=RB05084:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433322.1_f0:db_xref=GI_499130113:source_lat_lon=33.5387 N 113.1553 W:record_id=KC433322.1:GC_content=39.4321766562:protein_id=AGL75377.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=RB05084:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130112:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433322.1_f0:annotation_accessions=_'KC433322'_:source_feature_id=KC433322.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1])100:0.00122539[&&NHX:support=100.0:dist=0.00122538839345:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],((AF217783.1_f0:0.0664304[&&NHX:dist=0.0664304332365:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Iguana delicatissima:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217783.1_f0:db_xref=GI_11611715:GC_content=46.5734265734:record_id=AF217783.1:source_haplotype=1:protein_id=AAG39026.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAIMLKLGGYGIIRITLTLSPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVTTACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGLQTILPLMASWWLLANLTNMALPPTINLMGELMIISALFNWSTPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHMTMMNPTHTREHLIMALHMLPLTMLIMKPTLISSMLPC:source_organism=Iguana delicatissima:annotation_gi=11611714:source_db_xref=taxon_51191:genus=Iguana:name=AF217783.1_f0:annotation_accessions=_'AF217783'_:source_feature_id=AF217783.1_source:transl_table=2:annotation_source=mitochondrion Iguana delicatissima:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],((((HM352500.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0.0047393365:support=1.0:codon_start=1:nuc_degen_prop=0.0015772871:source_organelle=mitochondrion:feature_id=HM352500.1_f0:db_xref=GI_298205355:GC_content=44.7949526814:record_id=HM352500.1:source_haplotype=SA3:protein_id=ADI61884.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPXTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVTTACLIQTPWSITGAMTLMIAHGLTSSLLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTDPTHTREHLIMALHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205354:source_db_xref=taxon_8517:genus=Iguana:name=HM352500.1_f0:annotation_accessions=_'HM352500'_:source_feature_id=HM352500.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],(((HM352501.1_f0:0.00247737[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00247736715034:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352501.1_f0:db_xref=GI_298205357:GC_content=44.6372239748:record_id=HM352501.1:source_haplotype=SA4:protein_id=ADI61885.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVTTACLIQTPWSITGAMTLMIAHGLTSSLLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIMSALLNWSAPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTNPTHTREHLIMALHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205356:source_db_xref=taxon_8517:genus=Iguana:name=HM352501.1_f0:annotation_accessions=_'HM352501'_:source_feature_id=HM352501.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],HM352505.1_f0:0.0043779[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00437790278021:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352505.1_f0:db_xref=GI_298205365:GC_content=44.6372239748:record_id=HM352505.1:source_haplotype=CAR2:protein_id=ADI61889.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVTTACLIQTPWSITGAMTLMIAHGLTSSLLFCLANTNYERTHTRTLILAQGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIMSALLNWSAPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTNPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205364:source_db_xref=taxon_8517:genus=Iguana:name=HM352505.1_f0:annotation_accessions=_'HM352505'_:source_feature_id=HM352505.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.00896295[&&NHX:support=100.0:dist=0.00896294526005:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],AF217782.1_f0:0.0128502[&&NHX:dist=0.0128502385596:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217782.1_f0:db_xref=GI_11611713:GC_content=45.8741258741:record_id=AF217782.1:source_haplotype=Car1:protein_id=AAG39025.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGIIRITLTLSPMTHKLYYPFMILALWGIVMTSSICTRQTDLKSLIAYSSVSHMGLVTTACLIQTPWSITGAMTLMIAHGLTSSLLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIMSALLNWSAPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFAC:source_organism=Iguana iguana:annotation_gi=11611712:source_db_xref=taxon_8517:genus=Iguana:name=AF217782.1_f0:annotation_accessions=_'AF217782'_:source_feature_id=AF217782.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.00137206[&&NHX:support=100.0:dist=0.00137205948279:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],(JQ340913.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Geographic structure and cryptic lineages within common green iguanas Iguana iguana Linnaeus 1758'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=JQ340913.1_f0:db_xref=GI_402238029:GC_content=44.6372239748:record_id=JQ340913.1:source_haplotype=SA8:protein_id=AFQ38863.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVTTACLIQTPWSITGAMTLMIAHGLTSSLLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIMSALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=402238028:source_db_xref=taxon_8517:genus=Iguana:name=JQ340913.1_f0:annotation_accessions=_'JQ340913'_:source_feature_id=JQ340913.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],JQ340914.1_f0:0.00168656[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00168656354307:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Geographic structure and cryptic lineages within common green iguanas Iguana iguana Linnaeus 1758'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=JQ340914.1_f0:db_xref=GI_402238031:GC_content=44.7949526814:record_id=JQ340914.1:source_haplotype=SA9:protein_id=AFQ38864.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVTTACLIQTPWSITGAMTLMIAHGLTSSLLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIMSALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=402238030:source_db_xref=taxon_8517:genus=Iguana:name=JQ340914.1_f0:annotation_accessions=_'JQ340914'_:source_feature_id=JQ340914.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.0116628[&&NHX:support=100.0:dist=0.0116628051982:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.00424731[&&NHX:support=100.0:dist=0.00424731125328:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.019126[&&NHX:support=100.0:dist=0.0191259837993:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],((HM352503.1_f0:0.00186196[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00186196233754:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352503.1_f0:db_xref=GI_298205361:GC_content=44.7949526814:record_id=HM352503.1:source_haplotype=SA6:protein_id=ADI61887.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMTSSVCMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTNPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205360:source_db_xref=taxon_8517:genus=Iguana:name=HM352503.1_f0:annotation_accessions=_'HM352503'_:source_feature_id=HM352503.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],HM352504.1_f0:0.00144091[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00144091062748:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352504.1_f0:db_xref=GI_298205363:GC_content=45.1104100946:record_id=HM352504.1:source_haplotype=SA7:protein_id=ADI61888.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMTSSVCMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTNPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205362:source_db_xref=taxon_8517:genus=Iguana:name=HM352504.1_f0:annotation_accessions=_'HM352504'_:source_feature_id=HM352504.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.00740991[&&NHX:support=100.0:dist=0.00740991329265:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],HM352502.1_f0:0.00658315[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00658314569526:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352502.1_f0:db_xref=GI_298205359:GC_content=44.952681388:record_id=HM352502.1:source_haplotype=SA5:protein_id=ADI61886.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMVLALWGIVMTSSVCMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTNPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205358:source_db_xref=taxon_8517:genus=Iguana:name=HM352502.1_f0:annotation_accessions=_'HM352502'_:source_feature_id=HM352502.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.034179[&&NHX:support=100.0:dist=0.0341790151976:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.00536546[&&NHX:support=100.0:dist=0.00536546315991:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],(HM352510.1_f0:0.00724507[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00724507394549:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352510.1_f0:db_xref=GI_298205375:GC_content=44.7949526814:record_id=HM352510.1:source_haplotype=CA6:protein_id=ADI61894.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILAQGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTNPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205374:source_db_xref=taxon_8517:genus=Iguana:name=HM352510.1_f0:annotation_accessions=_'HM352510'_:source_feature_id=HM352510.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],((((HM352513.1_f0:0.00640421[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00640421452503:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352513.1_f0:db_xref=GI_298205381:GC_content=45.8990536278:record_id=HM352513.1:source_haplotype=CA9:protein_id=ADI61897.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMALHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205380:source_db_xref=taxon_8517:genus=Iguana:name=HM352513.1_f0:annotation_accessions=_'HM352513'_:source_feature_id=HM352513.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],HM352512.1_f0:0.00160768[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00160767686404:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352512.1_f0:db_xref=GI_298205379:GC_content=45.7413249211:record_id=HM352512.1:source_haplotype=CA8:protein_id=ADI61896.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205378:source_db_xref=taxon_8517:genus=Iguana:name=HM352512.1_f0:annotation_accessions=_'HM352512'_:source_feature_id=HM352512.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.00158464[&&NHX:support=100.0:dist=0.00158463577514:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],((HM352507.1_f0:0.00480469[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00480468739782:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352507.1_f0:db_xref=GI_298205369:GC_content=45.2681388013:record_id=HM352507.1:source_haplotype=CA3:protein_id=ADI61891.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQQSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205368:source_db_xref=taxon_8517:genus=Iguana:name=HM352507.1_f0:annotation_accessions=_'HM352507'_:source_feature_id=HM352507.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],HM352506.1_f0:0.00158115[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00158115467494:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352506.1_f0:db_xref=GI_298205367:GC_content=45.5835962145:record_id=HM352506.1:source_haplotype=CA2:protein_id=ADI61890.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205366:source_db_xref=taxon_8517:genus=Iguana:name=HM352506.1_f0:annotation_accessions=_'HM352506'_:source_feature_id=HM352506.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],HM352508.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352508.1_f0:db_xref=GI_298205371:GC_content=45.4258675079:record_id=HM352508.1:source_haplotype=CA4:protein_id=ADI61892.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205370:source_db_xref=taxon_8517:genus=Iguana:name=HM352508.1_f0:annotation_accessions=_'HM352508'_:source_feature_id=HM352508.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.00157882[&&NHX:support=100.0:dist=0.00157882372324:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],((HM352516.1_f0:0.0015509[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00155089922206:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352516.1_f0:db_xref=GI_298205387:GC_content=46.0567823344:record_id=HM352516.1:source_haplotype=NA3:protein_id=ADI61900.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTVLPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205386:source_db_xref=taxon_8517:genus=Iguana:name=HM352516.1_f0:annotation_accessions=_'HM352516'_:source_feature_id=HM352516.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],HM352515.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352515.1_f0:db_xref=GI_298205385:GC_content=45.8990536278:record_id=HM352515.1:source_haplotype=NA2:protein_id=ADI61899.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTVLPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205384:source_db_xref=taxon_8517:genus=Iguana:name=HM352515.1_f0:annotation_accessions=_'HM352515'_:source_feature_id=HM352515.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.00803977[&&NHX:support=100.0:dist=0.00803977226052:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],((HM352509.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352509.1_f0:db_xref=GI_298205373:GC_content=45.1104100946:record_id=HM352509.1:source_haplotype=CA5:protein_id=ADI61893.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205372:source_db_xref=taxon_8517:genus=Iguana:name=HM352509.1_f0:annotation_accessions=_'HM352509'_:source_feature_id=HM352509.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],HM352511.1_f0:0.00157603[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00157602954416:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352511.1_f0:db_xref=GI_298205377:GC_content=45.2681388013:record_id=HM352511.1:source_haplotype=CA7:protein_id=ADI61895.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205376:source_db_xref=taxon_8517:genus=Iguana:name=HM352511.1_f0:annotation_accessions=_'HM352511'_:source_feature_id=HM352511.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.00316612[&&NHX:support=100.0:dist=0.00316611872017:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],AF217786.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217786.1_f0:db_xref=GI_11611721:GC_content=46.013986014:record_id=AF217786.1:source_haplotype=CA1:protein_id=AAG39029.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLSAVLLKLGGYGIIRITLTLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFAC:source_organism=Iguana iguana:annotation_gi=11611720:source_db_xref=taxon_8517:genus=Iguana:name=AF217786.1_f0:annotation_accessions=_'AF217786'_:source_feature_id=AF217786.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.00588035[&&NHX:support=100.0:dist=0.00588035282099:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],(HM352514.1_f0:0.00318347[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00318346788469:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352514.1_f0:db_xref=GI_298205383:GC_content=45.1104100946:record_id=HM352514.1:source_haplotype=CA10:protein_id=ADI61898.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFA:source_organism=Iguana iguana:annotation_gi=298205382:source_db_xref=taxon_8517:genus=Iguana:name=HM352514.1_f0:annotation_accessions=_'HM352514'_:source_feature_id=HM352514.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],AF217784.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217784.1_f0:db_xref=GI_11611717:GC_content=46.1538461538:record_id=AF217784.1:source_haplotype=NA1:protein_id=AAG39027.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGIIRITLTLSPMTHKLYYPFMILALWGIVMASSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRSKLPLHITTTDPTHTREHLIMTLHMLPLIMLTMKPALASNMFAC:source_organism=Iguana iguana:annotation_gi=11611716:source_db_xref=taxon_8517:genus=Iguana:name=AF217784.1_f0:annotation_accessions=_'AF217784'_:source_feature_id=AF217784.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.00147135[&&NHX:support=100.0:dist=0.00147134838657:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.00446431[&&NHX:support=100.0:dist=0.00446430723208:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.026395[&&NHX:support=100.0:dist=0.0263949708477:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.0147443[&&NHX:support=100.0:dist=0.0147443426498:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],(AF217785.1_f0:0.00162251[&&NHX:dist=0.00162250808019:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217785.1_f0:db_xref=GI_11611719:GC_content=48.1118881119:record_id=AF217785.1:source_haplotype=SA1:protein_id=AAG39028.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGIIRITLTLSPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMTLMVAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALLNWSTPTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTTDPTHTREHLIMALHMLPLIMLTMKPALASNMFAC:source_organism=Iguana iguana:annotation_gi=11611718:source_db_xref=taxon_8517:genus=Iguana:name=AF217785.1_f0:annotation_accessions=_'AF217785'_:source_feature_id=AF217785.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 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northern neotropics_ mitochondrial and nuclear DNA phylogeography of the iguana Ctenosaura pectinata and related species'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=23-JUL-2008:source_mol_type=genomic DNA:annotation_organism=Ctenosaura hemilopha:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU246696.1_f0:db_xref=GI_165967509:GC_content=46.5240641711:record_id=EU246696.1:source_haplotype=H03:protein_id=ABY75635.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=LGAILLKLGGYGIIRTTLTLSPLTHKLYYPFMILALWGIVMTGSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTSWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLMTQR:source_organism=Ctenosaura 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mitochondrial and nuclear DNA phylogeography of the iguana Ctenosaura pectinata and related species'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=23-JUL-2008:source_mol_type=genomic DNA:annotation_organism=Ctenosaura pectinata:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU246749.1_f0:db_xref=GI_165967615:GC_content=44.2067736185:record_id=EU246749.1:source_haplotype=H57:protein_id=ABY75688.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=LAAILLKLGGYGIIRVTLMLSPLTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGATILMIAHGLTSSMLFCLANTNYERTHTRTLILARGLQILLPLMTSWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLMTQR:source_organism=Ctenosaura 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Does hybridization threaten an endangered iguana?'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=15-OCT-2009:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU271879.1_f0:db_xref=GI_166836670:GC_content=44.3620178042:record_id=EU271879.1:source_haplotype=6:protein_id=ABY90555.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIMRITLTLTPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=166836669:source_db_xref=taxon_500334:genus=Ctenosaura:name=EU271879.1_f0:annotation_accessions=_'EU271879'_:source_feature_id=EU271879.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Honduras:annotation_sequence_version=1],(GU331995.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Gene trees_ species and species trees in the Ctenosaura palearis clade'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=16-SEP-2010:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=GU331995.1_f0:db_xref=GI_281485244:GC_content=44.3620178042:record_id=GU331995.1:source_haplotype=2:protein_id=ADA70382.1:annotation_keywords=_''_:product=NADH dehygrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIRITLTLTPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=281485243:source_db_xref=taxon_500334:genus=Ctenosaura:name=GU331995.1_f0:annotation_accessions=_'GU331995'_:source_feature_id=GU331995.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:annotation_sequence_version=1],(EU271874.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:source_note=PCR_primers_fwd_name_ ND4_ rev_name_ ND4R1:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Gene flow between an endangered endemic iguana_ and its wide spread relative_ on the island of Utila_ Honduras_ when is hybridization a threat? Does hybridization threaten an endangered iguana?'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=15-OCT-2009:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU271874.1_f0:db_xref=GI_166836660:GC_content=44.3620178042:record_id=EU271874.1:source_haplotype=1:protein_id=ABY90550.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIRITLTLTPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=166836659:source_db_xref=taxon_500334:genus=Ctenosaura:name=EU271874.1_f0:annotation_accessions=_'EU271874'_:source_feature_id=EU271874.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Honduras:annotation_sequence_version=1],GU331997.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Gene trees_ species and species trees in the Ctenosaura palearis clade'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=16-SEP-2010:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=GU331997.1_f0:db_xref=GI_281485248:GC_content=44.3620178042:record_id=GU331997.1:source_haplotype=4:protein_id=ADA70384.1:annotation_keywords=_''_:product=NADH dehygrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIRITLTLTPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=281485247:source_db_xref=taxon_500334:genus=Ctenosaura:name=GU331997.1_f0:annotation_accessions=_'GU331997'_:source_feature_id=GU331997.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:annotation_sequence_version=1])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],EU271878.1_f0:0.00482834[&&NHX:dist=0.0048283375476:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Gene flow between an endangered endemic iguana_ and its wide spread relative_ on the island of Utila_ Honduras_ when is hybridization a threat? Does hybridization threaten an endangered iguana?'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=15-OCT-2009:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU271878.1_f0:db_xref=GI_166836668:GC_content=44.3620178042:record_id=EU271878.1:source_haplotype=5:protein_id=ABY90554.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIGKTLTLTPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=166836667:source_db_xref=taxon_500334:genus=Ctenosaura:name=EU271878.1_f0:annotation_accessions=_'EU271878'_:source_feature_id=EU271878.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Honduras:annotation_sequence_version=1])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],(((((EU407505.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_528_aa_TERM_:annotation_references=_Reference_title_'Phylogeography and hybridization in Ctenosaura species _Sauria_ Iguanidae_ from Caribbean Honduras_ insights from mitochondrial and nuclear DNA'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2008:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:source_collected_by=A. 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Does hybridization threaten an endangered iguana?'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=15-OCT-2009:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU271877.1_f0:db_xref=GI_166836666:GC_content=44.6587537092:record_id=EU271877.1:source_haplotype=4:protein_id=ABY90553.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIRITLTLTPMTHKLYYPFMILALWGIVMTSSVCMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=166836665:source_db_xref=taxon_500334:genus=Ctenosaura:name=EU271877.1_f0:annotation_accessions=_'EU271877'_:source_feature_id=EU271877.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Honduras:annotation_sequence_version=1],GU331998.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Gene trees_ species and species trees in the Ctenosaura palearis clade'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=16-SEP-2010:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=GU331998.1_f0:db_xref=GI_281485250:GC_content=44.6587537092:record_id=GU331998.1:source_haplotype=5:protein_id=ADA70385.1:annotation_keywords=_''_:product=NADH dehygrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIRITLTLTPMTHKLYYPFMILALWGIVMTSSVCMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=281485249:source_db_xref=taxon_500334:genus=Ctenosaura:name=GU331998.1_f0:annotation_accessions=_'GU331998'_:source_feature_id=GU331998.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:annotation_sequence_version=1])100:0.00155721[&&NHX:support=100.0:dist=0.00155721014334:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])53:1.74722e-06[&&NHX:support=53.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],(EU271876.1_f0:0.00155962[&&NHX:dist=0.00155962079127:source_note=PCR_primers_fwd_name_ ND4_ rev_name_ ND4R1:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Gene flow between an endangered endemic iguana_ and its wide spread relative_ on the island of Utila_ Honduras_ when is hybridization a threat? Does hybridization threaten an endangered iguana?'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=15-OCT-2009:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU271876.1_f0:db_xref=GI_166836664:GC_content=44.3620178042:record_id=EU271876.1:source_haplotype=3:protein_id=ABY90552.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIRITLTLTPMTHKLYYPFMILALWGIVMTSSVCMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSMTGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=166836663:source_db_xref=taxon_500334:genus=Ctenosaura:name=EU271876.1_f0:annotation_accessions=_'EU271876'_:source_feature_id=EU271876.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Honduras:annotation_sequence_version=1],(GU331996.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Gene trees_ species and species trees in the Ctenosaura palearis clade'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=16-SEP-2010:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=GU331996.1_f0:db_xref=GI_281485246:GC_content=44.5103857567:record_id=GU331996.1:source_haplotype=3:protein_id=ADA70383.1:annotation_keywords=_''_:product=NADH dehygrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIRITLTLTPMTHKLYYPFMILALWGIVMTSSVCMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=281485245:source_db_xref=taxon_500334:genus=Ctenosaura:name=GU331996.1_f0:annotation_accessions=_'GU331996'_:source_feature_id=GU331996.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:annotation_sequence_version=1],EU271875.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:source_note=PCR_primers_fwd_name_ ND4_ rev_name_ ND4R1:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Gene flow between an endangered endemic iguana_ and its wide spread relative_ on the island of Utila_ Honduras_ when is hybridization a threat? Does hybridization threaten an endangered iguana?'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=15-OCT-2009:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU271875.1_f0:db_xref=GI_166836662:GC_content=44.5103857567:record_id=EU271875.1:source_haplotype=2:protein_id=ABY90551.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIRITLTLTPMTHKLYYPFMILALWGIVMTSSVCMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQTILPLMTTWWLLANLTNMALPPTINLMGELTIISALFNWSQPTIILTGLGTLITAIYSLHMFLTTQRNKLPLHTITTDPTHTREHLIMALHMLPLILLIMKPIIISSTFA:source_organism=Ctenosaura bakeri:annotation_gi=166836661:source_db_xref=taxon_500334:genus=Ctenosaura:name=EU271875.1_f0:annotation_accessions=_'EU271875'_:source_feature_id=EU271875.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura bakeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Honduras:annotation_sequence_version=1])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])53:1.74722e-06[&&NHX:support=53.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],EU407506.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_517_aa_TERM_:annotation_references=_Reference_title_'Phylogeography and hybridization in Ctenosaura species _Sauria_ Iguanidae_ from Caribbean Honduras_ insights from mitochondrial and nuclear DNA'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2008:source_mol_type=genomic DNA:annotation_organism=Ctenosaura bakeri:source_collected_by=A. 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4:OTUs=SMF_79507:annotation_data_file_division=VRT:translation=LIAYSSVSHMGLVIAACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGLQTILPLMTSWWLFANLTNMALPPTINLVGELTIISALFNWSQPTIVLTGLGTLITAIYSLHMFLTTQRNKLPPHIITTDPTHTRE:source_organism=Ctenosaura flavidorsalis:annotation_gi=23393669:source_db_xref=taxon_189468:genus=Ctenosaura:name=AF417079.1_f0:annotation_accessions=_'AF417079'_:source_feature_id=AF417079.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura flavidorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=El 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4:annotation_data_file_division=VRT:translation=MLSPMTHKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSTTGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMTSWWLLANLTNMALPPTINLMGELTIISALFNWSPTTIILTGLGTLITAIYSLHMFLMTQRNMLPPHIMTQHPTHTREHLIMALHMLPLILLIMKPTLISSTFA:source_organism=Conolophus pallidus:annotation_gi=298205388:source_db_xref=taxon_57097:genus=Conolophus:name=HM352517.1_f0:annotation_accessions=_'HM352517'_:source_feature_id=HM352517.1_source:transl_table=2:annotation_source=mitochondrion Conolophus pallidus:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:annotation_sequence_version=1],EU271881.1_f0:0.0858268[&&NHX:dist=0.0858267978065:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Gene flow between an endangered endemic iguana_ and its wide spread relative_ on the island of Utila_ Honduras_ when is hybridization a threat? Does hybridization threaten an endangered iguana?'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=15-OCT-2009:source_mol_type=genomic DNA:annotation_organism=Amblyrhynchus cristatus:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU271881.1_f0:db_xref=GI_166836674:GC_content=46.4391691395:record_id=EU271881.1:source_haplotype=Out1:protein_id=ABY90557.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=LKLGGYGIIRITLTLSPMTYKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMTSWWLLANLTNMALPPTVNLMGELTIISALFNWSPLTIILTGLGTLITAIYSLHMFLMTQRNKLPLHITTASPTHTREHLIMALHMLPLTLLIMNPTIISSTFA:source_organism=Amblyrhynchus 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conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Cyclura pinguis:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217772.1_f0:db_xref=GI_11611693:GC_content=44.6153846154:record_id=AF217772.1:source_haplotype=1:protein_id=AAG39015.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGIIRITLTLTPMTQKLSYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILTRGLQIILPLMTSWWLLATLTNMALPPSINMMGELMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNTLPLHITTQNPTHTREHLIMALHTLPLMLLILKPALISNSFAC:source_organism=Cyclura pinguis:annotation_gi=11611692:source_db_xref=taxon_118683:genus=Cyclura:name=AF217772.1_f0:annotation_accessions=_'AF217772'_:source_feature_id=AF217772.1_source:transl_table=2:annotation_source=mitochondrion Cyclura pinguis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1],(((AF217771.1_f0:0.00735973[&&NHX:dist=0.00735973467051:source_sub_species=cornuta:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Cyclura cornuta cornuta:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217771.1_f0:db_xref=GI_11611691:GC_content=43.4965034965:record_id=AF217771.1:source_haplotype=1:protein_id=AAG39014.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGIIRITLTLAPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILARGFQIILPLMTSWWLLATLTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNTLPLHIITTDPTHTREHLIMALHTLPLALLILKPALVSNYFAC:source_organism=Cyclura cornuta cornuta:annotation_gi=11611690:source_db_xref=taxon_118685:genus=Cyclura:name=AF217771.1_f0:annotation_accessions=_'AF217771'_:source_feature_id=AF217771.1_source:transl_table=2:annotation_source=mitochondrion Cyclura cornuta cornuta:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1],(AF217769.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:source_sub_species=stejnegeri:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Cyclura cornuta stejnegeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217769.1_f0:db_xref=GI_11611687:GC_content=43.2167832168:record_id=AF217769.1:source_haplotype=1:protein_id=AAG39012.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGIIRITLTLAPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILARGFQIILPLMTSWWLLATLTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNMLPLHIITTDPTHTREHLIMALHTLPLALLILKPTLVSNYFAC:source_organism=Cyclura cornuta stejnegeri:annotation_gi=11611686:source_db_xref=taxon_118686:genus=Cyclura:name=AF217769.1_f0:annotation_accessions=_'AF217769'_:source_feature_id=AF217769.1_source:transl_table=2:annotation_source=mitochondrion Cyclura cornuta stejnegeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1],AF217770.1_f0:0.0014384[&&NHX:dist=0.00143840083728:source_sub_species=stejnegeri:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Cyclura cornuta stejnegeri:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217770.1_f0:db_xref=GI_11611689:GC_content=43.3566433566:record_id=AF217770.1:source_haplotype=2:protein_id=AAG39013.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGIIRITLTLAPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILARGFQIILPLMTSWWLLATLTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNMLPLHIITTDPTHTREHLIMALHTLPLALLILKPTLVSNYFAC:source_organism=Cyclura cornuta stejnegeri:annotation_gi=11611688:source_db_xref=taxon_118686:genus=Cyclura:name=AF217770.1_f0:annotation_accessions=_'AF217770'_:source_feature_id=AF217770.1_source:transl_table=2:annotation_source=mitochondrion Cyclura cornuta stejnegeri:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1])100:0.0044196[&&NHX:support=100.0:dist=0.00441959872958:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.0859257[&&NHX:support=100.0:dist=0.0859257463842:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],((AF217778.1_f0:0.00879455[&&NHX:dist=0.00879454781719:source_sub_species=carinata:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Cyclura carinata 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4:annotation_data_file_division=VRT:translation=PVAGSMVLAAILLKLGGYGIIRITLMLTPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILTRGLQIILPLMTSWWLLATLTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNILPPHIITTDPTHTREHLLMALHTLPMTLLILKPDLISNYFAC:source_organism=Cyclura carinata carinata:annotation_gi=11611706:source_db_xref=taxon_119558:genus=Cyclura:name=AF217779.1_f0:annotation_accessions=_'AF217779'_:source_feature_id=AF217779.1_source:transl_table=2:annotation_source=mitochondrion Cyclura carinata carinata:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1],(DQ397520.1_f0:0.00148396[&&NHX:dist=0.00148396336025:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Re-evaluating the 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Examining the subspecies designation of the Booby Cay iguana_ Cyclura carinata bartschi"_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=07-SEP-2007:source_mol_type=genomic DNA:annotation_organism=Cyclura carinata:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=DQ397519.1_f0:db_xref=GI_89275895:GC_content=46.0269865067:record_id=DQ397519.1:source_haplotype=3:protein_id=ABD66306.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=GYGIIRITLMLAPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILTRGLQIILPLMTSWWLLATLTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNILPPHIITTDPTHTREHLLMALHTLPMTLLILKPDLISNYFAC:source_organism=Cyclura 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Cay:annotation_sequence_version=1])100:0.00148934[&&NHX:support=100.0:dist=0.00148934355962:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.00632319[&&NHX:support=100.0:dist=0.00632319069354:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.0240655[&&NHX:support=100.0:dist=0.0240655135414:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],(AF217768.1_f0:0.00244313[&&NHX:dist=0.00244312990102:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Cyclura 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4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGVIRITLTLMPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILTRGLQIILPLMTSWWLLAILTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNIMPLHIITTDPTHTREHLIMALHTLPLVLLILKPDLISNYFAC:source_organism=Cyclura nubila nubila:annotation_gi=187566538:source_db_xref=taxon_118689:genus=Cyclura:name=EU532027.1_f0:annotation_accessions=_'EU532027'_:source_feature_id=EU532027.1_source:transl_table=2:annotation_source=mitochondrion Cyclura nubila nubila:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1],EU532025.1_f0:0.00145987[&&NHX:dist=0.0014598650446:source_sub_species=nubila:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'New haplotypes of Cyclura nubila nubila from Cuba changed the phylogenetic tree of rock-iguanas_ a challenge for conservation strategies?'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=01-JAN-2010:source_mol_type=genomic DNA:annotation_organism=Cyclura nubila nubila:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=EU532025.1_f0:db_xref=GI_187566509:GC_content=44.8951048951:record_id=EU532025.1:source_haplotype=7:protein_id=ACD13203.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGVIRITLTLMPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILTRGLQIILPLMTSWWLLAILTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNIMPLHIITTDPTHTREHLIMALHTLPLVLLILKPDLISNYFAC:source_organism=Cyclura nubila nubila:annotation_gi=187566508:source_db_xref=taxon_118689:genus=Cyclura:name=EU532025.1_f0:annotation_accessions=_'EU532025'_:source_feature_id=EU532025.1_source:transl_table=2:annotation_source=mitochondrion Cyclura nubila nubila:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1])100:0.00295446[&&NHX:support=100.0:dist=0.00295446245068:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],AF217764.1_f0:0.00146047[&&NHX:dist=0.00146046928593:source_sub_species=lewisi:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Cyclura nubila lewisi:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217764.1_f0:db_xref=GI_11611677:GC_content=44.8951048951:record_id=AF217764.1:source_haplotype=2:protein_id=AAG39007.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGVIRITLTLMPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILTRGLQIILPLMTSWWLLAILTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNIMPLHIITTDPTHTREHLIMALHTLPLVLLILKPDLISNYFAC:source_organism=Cyclura nubila lewisi:annotation_gi=11611676:source_db_xref=taxon_118688:genus=Cyclura:name=AF217764.1_f0:annotation_accessions=_'AF217764'_:source_feature_id=AF217764.1_source:transl_table=2:annotation_source=mitochondrion Cyclura nubila lewisi:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1])100:0.00126087[&&NHX:support=100.0:dist=0.0012608659398:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],AF217763.1_f0:0.00319021[&&NHX:dist=0.00319021402292:source_sub_species=lewisi:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogeography of the Caribbean rock iguana _Cyclura__ implications for conservation and insights on the biogeographic history of the West Indies'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Cyclura nubila lewisi:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217763.1_f0:db_xref=GI_11611675:GC_content=44.8951048951:record_id=AF217763.1:source_haplotype=1:protein_id=AAG39006.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGVIRITLTLMPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILTRGLQIILPLMTSWWLLAILTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNIMPLHIITTNPTHTREHLIMALHTLPLVLLILKPDLISNYFAC:source_organism=Cyclura nubila lewisi:annotation_gi=11611674:source_db_xref=taxon_118688:genus=Cyclura:name=AF217763.1_f0:annotation_accessions=_'AF217763'_:source_feature_id=AF217763.1_source:transl_table=2:annotation_source=mitochondrion Cyclura nubila lewisi:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 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...__:annotation_date=22-FEB-2006:source_mol_type=genomic DNA:annotation_organism=Cyclura rileyi:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF217777.1_f0:db_xref=GI_11611703:GC_content=43.9160839161:record_id=AF217777.1:source_haplotype=1:protein_id=AAG39020.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=PIAGSMVLAAILLKLGGYGIIRITLTLTPMTQKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVIAACLIQTPWSITGAMTLMIAHGLTSSMMFCLANTNYERTHTRTMILTRGLQIILPLMTSWWLLAILTNMALPPTINMMGEIMIISALFNWSSPTIILTGLGTLITAVYSLHMFLTTQRNIMPLHIITTNPTHTREHLIMALHTLPLILLTLKPHLVSNYFAC:source_organism=Cyclura rileyi:annotation_gi=11611702:source_db_xref=taxon_118684:genus=Cyclura:name=AF217777.1_f0:annotation_accessions=_'AF217777'_:source_feature_id=AF217777.1_source:transl_table=2:annotation_source=mitochondrion Cyclura rileyi:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1])100:0.0319718[&&NHX:support=100.0:dist=0.0319718300312:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.0141801[&&NHX:support=100.0:dist=0.0141801261581:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.040811[&&NHX:support=100.0:dist=0.040810957777:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.167862[&&NHX:support=100.0:dist=0.167862327072:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.0219977[&&NHX:support=100.0:dist=0.0219976877904:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],(HM352519.1_f0:0.0162933[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the 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klauberi:annotation_gi=298205392:source_db_xref=taxon_767358:genus=Sauromalus:name=HM352519.1_f0:annotation_accessions=_'HM352519'_:source_feature_id=HM352519.1_source:transl_table=2:annotation_source=mitochondrion Sauromalus klauberi _Spotted chuckwalla_:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Sauromalus'_:annotation_sequence_version=1],(HM352520.1_f0:0.00532942[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00532941887646:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Geographical structure and cryptic lineages within common green iguanas_ Iguana iguana'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=18-DEC-2012:source_mol_type=genomic DNA:annotation_organism=Sauromalus australis:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HM352520.1_f0:db_xref=GI_298205395:record_id=HM352520.1:GC_content=44.7949526814:protein_id=ADI61904.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:annotation_data_file_division=VRT:translation=TLSPMTHKLYYPFMILALWGIVMTGSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSITGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGLQTILPLMTSWWLLANLTNMALPPTINLMGELMIISALFNWSTPTIILTGLGTLITAVYSLHMFLMTQRNKLPLHITTMSPTHTREHLIMALHMLPLILLIMKPTLISNTFA:source_organism=Sauromalus australis:annotation_gi=298205394:source_db_xref=taxon_65996:genus=Sauromalus:name=HM352520.1_f0:annotation_accessions=_'HM352520'_:source_feature_id=HM352520.1_source:transl_table=2:annotation_source=mitochondrion Sauromalus australis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 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'Sauromalus'_:annotation_sequence_version=1])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.0922097[&&NHX:support=100.0:dist=0.0922097293884:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.0170409[&&NHX:support=100.0:dist=0.0170408911824:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.431359[&&NHX:support=100.0:dist=0.431358545741:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:0.00562561[&&NHX:support=100.0:dist=0.00562560919638:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],KC621625.1_f0:1.74722e-06[&&NHX:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogenetic relationships within the lizard clade Xantusiidae_ Using trees and divergence times to address evolutionary questions at multiple levels'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=29-JUN-2013:source_mol_type=genomic DNA:source_specimen_voucher=JAG:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Assembly Method __ Geneious v. 5.5_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC621625.1_f0:db_xref=GI_514252136:record_id=KC621625.1:GC_content=39.4345238095:protein_id=AGO43887.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=JAG:annotation_data_file_division=VRT:translation=ILLKLGGYGIIRITLALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGT:source_organism=Dipsosaurus dorsalis:annotation_gi=514252135:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC621625.1_f0:annotation_accessions=_'KC621625'_:source_feature_id=KC621625.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],((KC433328.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=MVZ_150059:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433328.1_f0:db_xref=GI_499130125:source_lat_lon=34.7467 N 116.3748 W:record_id=KC433328.1:GC_content=39.4321766562:protein_id=AGL75383.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=MVZ_150059:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130124:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433328.1_f0:annotation_accessions=_'KC433328'_:source_feature_id=KC433328.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1],KC433330.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=YPM_13364:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433330.1_f0:db_xref=GI_499130129:source_lat_lon=34.6236 N 115.6680 W:record_id=KC433330.1:GC_content=39.4321766562:protein_id=AGL75385.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=YPM_13364:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130128:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433330.1_f0:annotation_accessions=_'KC433330'_:source_feature_id=KC433330.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],(KC433331.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=YPM_13527:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433331.1_f0:db_xref=GI_499130131:source_lat_lon=35.1219 N 115.5277 W:record_id=KC433331.1:GC_content=39.4321766562:protein_id=AGL75386.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=YPM_13527:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130130:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433331.1_f0:annotation_accessions=_'KC433331'_:source_feature_id=KC433331.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1],(KC433327.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=MVZ_137449:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433327.1_f0:db_xref=GI_499130123:source_lat_lon=35.3003 N 117.9730 W:record_id=KC433327.1:GC_content=39.4321766562:protein_id=AGL75382.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=MVZ_137449:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130122:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433327.1_f0:annotation_accessions=_'KC433327'_:source_feature_id=KC433327.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1],KC433325.1_f0:1.74722e-06[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=1.74721835735e-06:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=JOS604:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433325.1_f0:db_xref=GI_499130119:source_lat_lon=33.9155 N 115.8850 W:record_id=KC433325.1:GC_content=39.4321766562:protein_id=AGL75380.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=JOS604:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSTPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130118:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433325.1_f0:annotation_accessions=_'KC433325'_:source_feature_id=KC433325.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1])53:1.74722e-06[&&NHX:support=53.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])47:1.74722e-06[&&NHX:support=47.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout])100:1.74722e-06[&&NHX:support=100.0:dist=1.74721835735e-06:name=NoName:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout],KC433320.1_f0:0.00170744[&&NHX:note=TAA stop codon is completed by the addition of 3' A residues to the mRNA:dist=0.00170743865472:tree_method_id=571221413667810.4_nad4@MafftLinsi@gappyout:transl_except=_pos_634_aa_TERM_:annotation_references=_Reference_title_'Evolutionary hotspots in the Mojave Desert'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=03-OCT-2013:source_mol_type=genomic DNA:source_specimen_voucher=CSDD010608:annotation_organism=Dipsosaurus dorsalis:annotation_comment=##Assembly-Data-START##_Sequencing Technology __ Sanger dideoxy sequencing_##Assembly-Data-END##:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=KC433320.1_f0:db_xref=GI_499130109:source_lat_lon=36.0122 N 114.7088 W:record_id=KC433320.1:GC_content=39.5899053628:protein_id=AGL75375.1:annotation_keywords=_''_:product=NADH dehydrogenase subunit 4:OTUs=CSDD010608:annotation_data_file_division=VRT:translation=ALTPMTNKLYYPFMILALWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVITACLIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHTRTLILARGFQIILPLMATWWLLANLTNMALPPTINLMGELTIITALFNWSAPTIILTGLGTLLTAVYSLHMFLMTQRNKLTPHITLTNPTHTREHLIMTLHIMPLLLLIMKPTLILGTFT:source_organism=Dipsosaurus dorsalis:annotation_gi=499130108:source_db_xref=taxon_51217:genus=Dipsosaurus:name=KC433320.1_f0:annotation_accessions=_'KC433320'_:source_feature_id=KC433320.1_source:transl_table=2:annotation_source=mitochondrion Dipsosaurus dorsalis:gene=ND4:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Dipsosaurus'_:annotation_sequence_version=1]);
cytb
Alignment method: MafftLinsi
Trimming method: gappyout
Tree method: fD_fb
Tree Method ID: 571221413667810.4_cytb@MafftLinsi@gappyout
newick format
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nhx format
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Gentile:prot_degen_prop=0:source_isolate=BL20:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=FJ535865.1_f0:db_xref=GI_222355909:record_id=FJ535865.1:GC_content=45.6424079066:protein_id=ACM48581.1:product=cytochrome b:source_organism=Conolophus subcristatus:OTUs=BL20:annotation_data_file_division=VRT:translation=ILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHICRDVQYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFVIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:annotation_keywords=_''_:annotation_gi=222355908:source_db_xref=taxon_31140:genus=Conolophus:source_sex=male:name=FJ535865.1_f0:annotation_accessions=_'FJ535865'_:source_feature_id=FJ535865.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_collection_date=25-Jul-2005:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:source_country=Ecuador_ Baltra_ Galapagos:annotation_sequence_version=1])0:2.72838e-06[&&NHX:support=0.0:dist=2.72837743499e-06:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],FJ535867.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'An overlooked pink species of land iguana in the Galapagos'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=07-FEB-2009:source_mol_type=genomic DNA:annotation_organism=Conolophus subcristatus:source_collected_by=G. Gentile:prot_degen_prop=0:source_isolate=BL23:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=FJ535867.1_f0:db_xref=GI_222355913:record_id=FJ535867.1:GC_content=45.6424079066:protein_id=ACM48583.1:product=cytochrome b:source_organism=Conolophus subcristatus:OTUs=BL23:annotation_data_file_division=VRT:translation=ILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHICRDVQYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFVIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:annotation_keywords=_''_:annotation_gi=222355912:source_db_xref=taxon_31140:genus=Conolophus:source_sex=male:name=FJ535867.1_f0:annotation_accessions=_'FJ535867'_:source_feature_id=FJ535867.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_collection_date=25-Jul-2005:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:source_country=Ecuador_ Baltra_ Galapagos:annotation_sequence_version=1])0:2.72838e-06[&&NHX:support=0.0:dist=2.72837743499e-06:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],(AY948122.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Development of primers to characterize the mitochondrial control region of Gal pagos land and marine iguanas _Conolophus and Amblyrhynchus_'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=11-AUG-2005:source_mol_type=genomic DNA:annotation_organism=Conolophus subcristatus:prot_degen_prop=0:source_isolate=Seymour Norte C087:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AY948122.1_f0:db_xref=GI_61652755:record_id=AY948122.1:GC_content=45.9283387622:protein_id=AAX47957.1:annotation_keywords=_''_:product=cytochrome b:OTUs=Seymour_Norte_C087:annotation_data_file_division=VRT:translation=QYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFVIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:source_organism=Conolophus subcristatus:annotation_gi=61652754:source_db_xref=taxon_31140:genus=Conolophus:name=AY948122.1_f0:annotation_accessions=_'AY948122'_:source_feature_id=AY948122.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:annotation_sequence_version=1],(AY948121.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Development of primers to characterize the mitochondrial control region of Gal pagos land and marine iguanas _Conolophus and Amblyrhynchus_'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=11-AUG-2005:source_mol_type=genomic DNA:annotation_organism=Conolophus subcristatus:prot_degen_prop=0:source_isolate=Seymour Norte 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'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:annotation_sequence_version=1],(((U88951.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'The microevolution of the Galapagos marine iguanas _Amblyrhynchus cristatus_ assessed by nuclear and mitochondrial genetic analyses'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=05-JUN-2000:source_mol_type=genomic DNA:annotation_organism=Conolophus pallidus:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=U88951.1_f0:db_xref=GI_4099619:record_id=U88951.1:GC_content=45.9694989107:protein_id=AAD00662.1:annotation_keywords=_''_:product=cytochrome 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Jaramillo_ M. Masaquisa and R. 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Glaberman and S. 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Glaberman and S. 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cristatus:prot_degen_prop=0:source_isolate=Santa Cruz 8:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AY948118.1_f0:db_xref=GI_61652747:record_id=AY948118.1:GC_content=46.9055374593:protein_id=AAX47953.1:annotation_keywords=_''_:product=cytochrome b:OTUs=Santa_Cruz_8:annotation_data_file_division=VRT:translation=QYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDNATLTRFFTFHFLLPFAIIGVTMLHLLFLHETGSNNPIGLNSNPDKIPFHPYFTYKDLLGATLMTIALLSLALFSPNLLGDPENYTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMVVPLLHLSKQRSNTFRPFSQALFWILVSNVLILTWIGGQPVEHPFIIIGQLASASYFLIFLTISPITALLENKLLNW:source_organism=Amblyrhynchus cristatus:annotation_gi=61652746:source_db_xref=taxon_51208:genus=Amblyrhynchus:name=AY948118.1_f0:annotation_accessions=_'AY948118'_:source_feature_id=AY948118.1_source:transl_table=2:annotation_source=mitochondrion Amblyrhynchus cristatus:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Amblyrhynchus'_:annotation_sequence_version=1])100:0.00130499[&&NHX:support=100.0:dist=0.00130499119298:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout])100:0.0899701[&&NHX:support=100.0:dist=0.0899701047074:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],((AF020255.1_f0:0.113331[&&NHX:dist=0.113330573597:source_note=specimen from Cuba_ _pop. #27_:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'A Phylogenetic analysis of body size evolution and biogeography in chuckwallas _Sauromalus_ and other iguanines'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=30-SEP-1997:source_mol_type=genomic DNA:annotation_organism=Cyclura nubila:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF020255.1_f0:db_xref=GI_2444367:record_id=AF020255.1:GC_content=44.1241685144:protein_id=AAB71582.1:annotation_keywords=_''_:product=cytochrome b:annotation_data_file_division=VRT:translation=FIDLPTPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTANISHAFSSVVHICRDVQYGWLIRNLHANGASMFFICLYLHIGRGLYYGSYLYKETWNLGVILLLLVMATAFVGYVLPWGQMSLWGATVITNLLSAIPYVGTILVEWIWGGYSVDNPTLTRFFTFHFLLPFVIMGVTILHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGAILMTMALLTLTLFSPNLLSDPENFTPANPLITPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMMVPLLHLSKQRTNMF:source_organism=Cyclura nubila:annotation_gi=2444366:source_db_xref=taxon_51214:genus=Cyclura:name=AF020255.1_f0:annotation_accessions=_'AF020255'_:source_feature_id=AF020255.1_source:transl_table=2:annotation_source=mitochondrion Cyclura nubila:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1],U88955.1_f0:0.0559537[&&NHX:dist=0.0559536844812:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'The microevolution of the Galapagos marine iguanas _Amblyrhynchus cristatus_ assessed by nuclear and mitochondrial genetic analyses'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=05-JUN-2000:source_mol_type=genomic DNA:annotation_organism=Cyclura cornuta:prot_degen_prop=0.0065359477:support=1.0:codon_start=2:nuc_degen_prop=0.0021786492:source_organelle=mitochondrion:feature_id=U88955.1_f0:db_xref=GI_4099617:record_id=U88955.1:GC_content=44.8801742919:protein_id=AAD00661.1:annotation_keywords=_''_:product=cytochrome b:annotation_data_file_division=VRT:translation=XSHPILKIINNSFIDLPTPSNISSWWNFGSLLGLCLIIQVLTGLFLAMHYTANISHAFSSVAHICRDVQYGWLIRNLHANGASMFFICLYLHIGRGLYYGSYLYKETWNLGVILLLLVMATAFVGYVLPWGQMSLWGATVITNLLSAIPYMGT:source_organism=Cyclura cornuta:annotation_gi=4099616:source_db_xref=taxon_57098:name=U88955.1_f0:annotation_accessions=_'U88955'_:source_feature_id=U88955.1_source:transl_table=2:annotation_source=mitochondrion Cyclura cornuta _rhinocerus iguana_:genus=Cyclura:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Cyclura'_:annotation_sequence_version=1])100:0.136104[&&NHX:support=100.0:dist=0.13610427202:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],((U88954.1_f0:0.0565808[&&NHX:dist=0.0565807785812:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'The microevolution of the Galapagos marine iguanas _Amblyrhynchus cristatus_ assessed by nuclear and mitochondrial genetic analyses'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=05-JUN-2000:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0.0022522523:source_organelle=mitochondrion:feature_id=U88954.1_f0:db_xref=GI_4099625:record_id=U88954.1:GC_content=47.2972972973:protein_id=AAD00665.1:annotation_keywords=_''_:product=cytochrome b:annotation_data_file_division=VRT:translation=KSHPILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIMQVLTGLFLAMHYTADILSAFSSVAHICRDVQYGWLIRNLHANGASMFFICLYLHIGRGLYYGSYLFKETWNIGVVLLLLVMATAFVGYVLPWGQMSFWGATVITNLLSA:source_organism=Iguana iguana:annotation_gi=4099624:source_db_xref=taxon_8517:name=U88954.1_f0:annotation_accessions=_'U88954'_:source_feature_id=U88954.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:genus=Iguana:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1],AF020251.1_f0:0.0453044[&&NHX:dist=0.0453043929494:source_note=pop. #23:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'A Phylogenetic analysis of body size evolution and biogeography in chuckwallas _Sauromalus_ and other iguanines'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=30-SEP-1997:source_mol_type=genomic DNA:annotation_organism=Iguana iguana:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF020251.1_f0:db_xref=GI_2444359:record_id=AF020251.1:GC_content=48.5587583149:protein_id=AAB71578.1:annotation_keywords=_''_:product=cytochrome b:annotation_data_file_division=VRT:translation=FIDLPAPSNISAWWNFGSLLGLCLIMQTLTGLFLAMHYTADISSAFSSVAHICRDVQHGWLIRNLHANGASMFFICLYLHIGRGLYYGSYLFKETWNIGVILLLLVMATAFVGYVLPWGQMSFWGATVMTNLLSAIPYVGATLVEWIWGGFSVDNATLTRFFTFHFLLPFMITALTMLHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGALLMIIALLTLALFLPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMVVPLLHLSKQRSTTF:source_organism=Iguana iguana:annotation_gi=2444358:source_db_xref=taxon_8517:genus=Iguana:name=AF020251.1_f0:annotation_accessions=_'AF020251'_:source_feature_id=AF020251.1_source:transl_table=2:annotation_source=mitochondrion Iguana iguana _common iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Iguana'_:annotation_sequence_version=1])100:0.0586657[&&NHX:support=100.0:dist=0.0586656539195:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],(((((((((AF020257.1_f0:0.00423491[&&NHX:dist=0.0042349091978:source_note=pop. #29:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'A Phylogenetic analysis of body size evolution and biogeography in chuckwallas _Sauromalus_ and other iguanines'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=30-SEP-1997:source_mol_type=genomic DNA:annotation_organism=Brachylophus fasciatus:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF020257.1_f0:db_xref=GI_2444371:record_id=AF020257.1:GC_content=47.6718403548:protein_id=AAB71584.1:annotation_keywords=_''_:product=cytochrome b:annotation_data_file_division=VRT:translation=LIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAVPYLGTALVEWVWGGFSVDNATLTRFFTFHFLLPFMIIGASAVHLLFLHETGSNNPTGLHSNSDKVPFHPYFSYKDLLGAIITTLALLTLALFSPNLLGDPENFSPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILTIIPLLHTSKQRSNTF:source_organism=Brachylophus fasciatus:annotation_gi=2444370:source_db_xref=taxon_46195:genus=Brachylophus:name=AF020257.1_f0:annotation_accessions=_'AF020257'_:source_feature_id=AF020257.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus fasciatus _banded iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Brachylophus'_:annotation_sequence_version=1],(AF459044.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:source_note=biotype_ Kadavu:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogenetic relationships between Fijian crested iguanas _Brachylophus vitiensis_ and Fijian and Tongan banded iguanas _B. fasciatus_ inferred from mitochondrial cytochrome b sequence and microsatellites'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=02-JAN-2003:source_mol_type=genomic DNA:annotation_organism=Brachylophus fasciatus:prot_degen_prop=0:source_isolate=1E6F5C2:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF459044.1_f0:db_xref=GI_27462747:record_id=AF459044.1:GC_content=46.0567823344:protein_id=AAO15567.1:annotation_keywords=_''_:product=cytochrome b:OTUs=1E6F5C2:annotation_data_file_division=VRT:translation=WNFGSLLGLCLIVQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASVFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLVMATAFVGYVLPWG:source_organism=Brachylophus fasciatus:annotation_gi=27462746:source_db_xref=taxon_46195:genus=Brachylophus:name=AF459044.1_f0:annotation_accessions=_'AF459044'_:source_feature_id=AF459044.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus fasciatus _banded iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Brachylophus'_:annotation_sequence_version=1],AF459045.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:source_note=biotype_ Kadavu:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogenetic relationships between Fijian crested iguanas _Brachylophus vitiensis_ and Fijian and Tongan banded iguanas _B. fasciatus_ inferred from mitochondrial cytochrome b sequence and microsatellites'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=02-JAN-2003:source_mol_type=genomic DNA:annotation_organism=Brachylophus fasciatus:prot_degen_prop=0:source_isolate=1E58DDF:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF459045.1_f0:db_xref=GI_27462749:record_id=AF459045.1:GC_content=45.7413249211:protein_id=AAO15568.1:annotation_keywords=_''_:product=cytochrome b:OTUs=1E58DDF:annotation_data_file_division=VRT:translation=WNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASVFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLVMATAFVGYVLPWG:source_organism=Brachylophus fasciatus:annotation_gi=27462748:source_db_xref=taxon_46195:genus=Brachylophus:name=AF459045.1_f0:annotation_accessions=_'AF459045'_:source_feature_id=AF459045.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus fasciatus _banded iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Brachylophus'_:annotation_sequence_version=1])100:0.00464902[&&NHX:support=100.0:dist=0.00464901932044:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout])100:0.0100919[&&NHX:support=100.0:dist=0.0100919042877:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],AF459046.1_f0:0.0604798[&&NHX:dist=0.0604798304771:source_note=biotype_ Tongatapu:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogenetic relationships between Fijian crested iguanas _Brachylophus vitiensis_ and Fijian and Tongan banded iguanas _B. fasciatus_ inferred from mitochondrial cytochrome b sequence and microsatellites'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=02-JAN-2003:source_mol_type=genomic DNA:annotation_organism=Brachylophus fasciatus:prot_degen_prop=0:source_isolate=TBP1:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF459046.1_f0:db_xref=GI_27462751:record_id=AF459046.1:GC_content=44.4794952681:protein_id=AAO15569.1:annotation_keywords=_''_:product=cytochrome b:OTUs=TBP1:annotation_data_file_division=VRT:translation=WNFGSLLGLCLITQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYTFKETWNVGVVLLLLVMATAFVGYVLPWG:source_organism=Brachylophus fasciatus:annotation_gi=27462750:source_db_xref=taxon_46195:genus=Brachylophus:name=AF459046.1_f0:annotation_accessions=_'AF459046'_:source_feature_id=AF459046.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus fasciatus _banded iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Brachylophus'_:annotation_sequence_version=1])100:0.019586[&&NHX:support=100.0:dist=0.0195859627984:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],AF459043.1_f0:0.00618586[&&NHX:dist=0.00618586119849:source_note=biotype_ Ovalau:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogenetic relationships between Fijian crested iguanas _Brachylophus vitiensis_ and Fijian and Tongan banded iguanas _B. fasciatus_ inferred from mitochondrial cytochrome b sequence and microsatellites'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=02-JAN-2003:source_mol_type=genomic DNA:annotation_organism=Brachylophus fasciatus:prot_degen_prop=0:source_isolate=1BDD540:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF459043.1_f0:db_xref=GI_27462745:record_id=AF459043.1:GC_content=45.7413249211:protein_id=AAO15566.1:annotation_keywords=_''_:product=cytochrome b:OTUs=1BDD540:annotation_data_file_division=VRT:translation=WNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWFLRNLHANGASMFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLVMATAFVGYVLPWG:source_organism=Brachylophus fasciatus:annotation_gi=27462744:source_db_xref=taxon_46195:genus=Brachylophus:name=AF459043.1_f0:annotation_accessions=_'AF459043'_:source_feature_id=AF459043.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus fasciatus _banded iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Brachylophus'_:annotation_sequence_version=1])100:0.00271051[&&NHX:support=100.0:dist=0.00271050980288:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],AF459038.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:source_note=biotype_ Monuriki:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogenetic relationships between Fijian crested iguanas _Brachylophus vitiensis_ and Fijian and Tongan banded iguanas _B. fasciatus_ inferred from mitochondrial cytochrome b sequence and microsatellites'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=02-JAN-2003:source_mol_type=genomic DNA:annotation_organism=Brachylophus vitiensis:prot_degen_prop=0:source_isolate=IgC1:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF459038.1_f0:db_xref=GI_27462735:record_id=AF459038.1:GC_content=45.7413249211:protein_id=AAO15561.1:annotation_keywords=_''_:product=cytochrome b:OTUs=IgC1:annotation_data_file_division=VRT:translation=WNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLVMATAFVGYVLPWG:source_organism=Brachylophus vitiensis:annotation_gi=27462734:source_db_xref=taxon_46196:genus=Brachylophus:name=AF459038.1_f0:annotation_accessions=_'AF459038'_:source_feature_id=AF459038.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus vitiensis _crested iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Brachylophus'_:annotation_sequence_version=1])100:0.00440921[&&NHX:support=100.0:dist=0.00440921447138:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],U48836.2_f0:0.0124309[&&NHX:dist=0.0124308648681:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Genetic discrimination between the crested iguana Brachylophus vitiensis and the banded iguana Brachylophus fasciatus'_ ...__ Reference_title_'Direct Submission'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=13-MAR-2002:source_mol_type=genomic DNA:source_dev_stage=Adult:annotation_organism=Brachylophus vitiensis:annotation_comment=On Mar 11_ 2002 this sequence version replaced gi_1236064.:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=U48836.2_f0:db_xref=GI_19343368:record_id=U48836.2:GC_content=45.3201970443:protein_id=AAA93375.2:annotation_keywords=_''_:function=mitochondrial electron 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...__:annotation_date=02-JAN-2003:source_mol_type=genomic DNA:annotation_organism=Brachylophus vitiensis:prot_degen_prop=0:source_isolate=Waya1:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF459039.1_f0:db_xref=GI_27462737:record_id=AF459039.1:GC_content=45.4258675079:protein_id=AAO15562.1:annotation_keywords=_''_:product=cytochrome b:OTUs=Waya1:annotation_data_file_division=VRT:translation=WNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLVMATAFVGYVLPWG:source_organism=Brachylophus vitiensis:annotation_gi=27462736:source_db_xref=taxon_46196:genus=Brachylophus:name=AF459039.1_f0:annotation_accessions=_'AF459039'_:source_feature_id=AF459039.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus vitiensis _crested iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Brachylophus'_:annotation_sequence_version=1])100:2.72838e-06[&&NHX:support=100.0:dist=2.72837743499e-06:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],((AF459037.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:source_note=biotype_ Yadua Taba:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogenetic relationships between Fijian crested iguanas _Brachylophus vitiensis_ and Fijian and Tongan banded iguanas _B. fasciatus_ inferred from mitochondrial cytochrome b sequence and microsatellites'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=02-JAN-2003:source_mol_type=genomic DNA:annotation_organism=Brachylophus vitiensis:prot_degen_prop=0:source_isolate=22bda2:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF459037.1_f0:db_xref=GI_27462733:record_id=AF459037.1:GC_content=45.7413249211:protein_id=AAO15560.1:annotation_keywords=_''_:product=cytochrome b:OTUs=22bda2:annotation_data_file_division=VRT:translation=WNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLVMATAFVGYVLPWG:source_organism=Brachylophus vitiensis:annotation_gi=27462732:source_db_xref=taxon_46196:genus=Brachylophus:name=AF459037.1_f0:annotation_accessions=_'AF459037'_:source_feature_id=AF459037.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus vitiensis _crested iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 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...__:annotation_date=13-MAR-2002:source_mol_type=genomic DNA:source_dev_stage=Adult:annotation_organism=Brachylophus vitiensis:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=U48838.1_f0:db_xref=GI_1236069:record_id=U48838.1:GC_content=45.1476793249:protein_id=AAA93377.1:annotation_keywords=_''_:function=mitochondrial electron transport:product=cytochrome B:annotation_data_file_division=VRT:translation=MTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLV:source_organism=Brachylophus vitiensis:annotation_gi=1236068:source_db_xref=taxon_46196:name=U48838.1_f0:annotation_accessions=_'U48838'_:source_feature_id=U48838.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus vitiensis _crested iguana_:source_tissue_type=Blood:genus=Brachylophus:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 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gi_1236062.:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=U48835.2_f0:db_xref=GI_19343366:record_id=U48835.2:GC_content=46.568627451:protein_id=AAA93374.2:annotation_keywords=_''_:function=mitochondrial electron transport:product=cytochrome B:annotation_data_file_division=VRT:translation=GLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYAFKETWNV:source_organism=Brachylophus vitiensis:annotation_gi=19343365:source_db_xref=taxon_46196:name=U48835.2_f0:annotation_accessions=_'U48835'_:source_feature_id=U48835.2_source:transl_table=2:annotation_source=mitochondrion Brachylophus vitiensis _crested iguana_:source_tissue_type=Blood:genus=Brachylophus:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Brachylophus'_:annotation_sequence_version=2])100:0.00435546[&&NHX:support=100.0:dist=0.00435546053108:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout])100:0.00878278[&&NHX:support=100.0:dist=0.00878277804756:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout])100:0.00906771[&&NHX:support=100.0:dist=0.00906771117012:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],(AF459040.1_f0:0.00458824[&&NHX:dist=0.00458824326344:source_note=biotype_ Waya:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogenetic relationships between Fijian crested iguanas _Brachylophus vitiensis_ and Fijian and Tongan banded iguanas _B. fasciatus_ inferred from mitochondrial cytochrome b sequence and microsatellites'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=02-JAN-2003:source_mol_type=genomic DNA:annotation_organism=Brachylophus vitiensis:prot_degen_prop=0:source_isolate=Waya4:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF459040.1_f0:db_xref=GI_27462739:record_id=AF459040.1:GC_content=46.0567823344:protein_id=AAO15563.1:annotation_keywords=_''_:product=cytochrome b:OTUs=Waya4:annotation_data_file_division=VRT:translation=WNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYAFKDTWNVGVILLLLVMATAFVGYVLPWG:source_organism=Brachylophus vitiensis:annotation_gi=27462738:source_db_xref=taxon_46196:genus=Brachylophus:name=AF459040.1_f0:annotation_accessions=_'AF459040'_:source_feature_id=AF459040.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus vitiensis _crested iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 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DNA:source_dev_stage=Adult:annotation_organism=Brachylophus fasciatus:annotation_comment=On Mar 11_ 2002 this sequence version replaced gi_1236058.:prot_degen_prop=0:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=U48833.2_f0:db_xref=GI_19343364:record_id=U48833.2:GC_content=45.8333333333:protein_id=AAA93372.2:annotation_keywords=_''_:function=mitochondrial electron transport:product=cytochrome B:annotation_data_file_division=VRT:translation=IMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLVM:source_organism=Brachylophus fasciatus:annotation_gi=19343363:source_db_xref=taxon_46195:name=U48833.2_f0:annotation_accessions=_'U48833'_:source_feature_id=U48833.2_source:transl_table=2:annotation_source=mitochondrion Brachylophus fasciatus _banded iguana_:source_tissue_type=Blood:genus=Brachylophus:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Brachylophus'_:annotation_sequence_version=2])100:2.72838e-06[&&NHX:support=100.0:dist=2.72837743499e-06:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],AF459042.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:source_note=biotype_ Ovalau:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'Phylogenetic relationships between Fijian crested iguanas _Brachylophus vitiensis_ and Fijian and Tongan banded iguanas _B. fasciatus_ inferred from mitochondrial cytochrome b sequence and microsatellites'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=02-JAN-2003:source_mol_type=genomic DNA:annotation_organism=Brachylophus fasciatus:prot_degen_prop=0:source_isolate=1E579C1:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF459042.1_f0:db_xref=GI_27462743:record_id=AF459042.1:GC_content=46.6876971609:protein_id=AAO15565.1:annotation_keywords=_''_:product=cytochrome b:OTUs=1E579C1:annotation_data_file_division=VRT:translation=WNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHISRDVQHGWLLRNLHANGASMFFICIYLHIGRGLYYGSYAFKETWNVGVILLLLVMATAFVGYVLPWG:source_organism=Brachylophus fasciatus:annotation_gi=27462742:source_db_xref=taxon_46195:genus=Brachylophus:name=AF459042.1_f0:annotation_accessions=_'AF459042'_:source_feature_id=AF459042.1_source:transl_table=2:annotation_source=mitochondrion Brachylophus fasciatus _banded iguana_:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 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...__ Reference_title_'Direct Submission'_ ...__:annotation_date=30-SEP-1997:source_mol_type=genomic DNA:annotation_organism=Sauromalus ater:prot_degen_prop=0:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=AF020223.1_f0:db_xref=GI_2444303:record_id=AF020223.1:GC_content=49.0022172949:protein_id=AAB71550.1:annotation_keywords=_''_:product=cytochrome b:source_strain=obesus:annotation_data_file_division=VRT:translation=LIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTADISSAFSSIAHICRDVQHGWLIRNLHANGASMFFICLYLHIGRGLYYGSYLFKETWNIGVVLLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGATLVEWIWGGFSVDNATLTRFFTFHFLLPFMIIGLTMMHLLFLHETGSNNPTGLNSNPDKIPFHPYFSYKDLLGATLMIILLLTLTLFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRSNTF:source_organism=Sauromalus ater:annotation_gi=2444302:source_db_xref=taxon_65995:genus=Sauromalus:name=AF020223.1_f0:annotation_accessions=_'AF020223'_:source_feature_id=AF020223.1_source:transl_table=2:annotation_source=mitochondrion 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Rosa and M. 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Rosa and M. 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Rosa and M. 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Rosa and M. 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Rosa and M. Milinkovitch:prot_degen_prop=0:source_isolate=PZS10:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=FJ535917.1_f0:db_xref=GI_222356013:record_id=FJ535917.1:GC_content=45.5525606469:protein_id=ACM48633.1:product=cytochrome b:source_organism=Conolophus subcristatus:OTUs=PZS10:annotation_data_file_division=VRT:translation=ILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHICRDVQYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFMIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:annotation_keywords=_''_:annotation_gi=222356012:source_db_xref=taxon_31140:genus=Conolophus:name=FJ535917.1_f0:annotation_accessions=_'FJ535917'_:source_feature_id=FJ535917.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_collection_date=24-May-2003:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:source_country=Ecuador_ Plaza Sur_ Galapagos:annotation_sequence_version=1],((FJ535919.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'An overlooked pink species of land iguana in the Galapagos'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=07-FEB-2009:source_mol_type=genomic DNA:annotation_organism=Conolophus subcristatus:source_collected_by=S. Rosa and M. Milinkovitch:prot_degen_prop=0:source_isolate=PZS3:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=FJ535919.1_f0:db_xref=GI_222356017:record_id=FJ535919.1:GC_content=45.5525606469:protein_id=ACM48635.1:product=cytochrome b:source_organism=Conolophus subcristatus:OTUs=PZS3:annotation_data_file_division=VRT:translation=ILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHICRDVQYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFMIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:annotation_keywords=_''_:annotation_gi=222356016:source_db_xref=taxon_31140:genus=Conolophus:name=FJ535919.1_f0:annotation_accessions=_'FJ535919'_:source_feature_id=FJ535919.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_collection_date=24-May-2003:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:source_country=Ecuador_ Plaza Sur_ Galapagos:annotation_sequence_version=1],FJ535922.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'An overlooked pink species of land iguana in the Galapagos'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=07-FEB-2009:source_mol_type=genomic DNA:annotation_organism=Conolophus subcristatus:source_collected_by=S. Rosa and M. Milinkovitch:prot_degen_prop=0:source_isolate=PZS6:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=FJ535922.1_f0:db_xref=GI_222356023:record_id=FJ535922.1:GC_content=45.5525606469:protein_id=ACM48638.1:product=cytochrome b:source_organism=Conolophus subcristatus:OTUs=PZS6:annotation_data_file_division=VRT:translation=ILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHICRDVQYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFMIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:annotation_keywords=_''_:annotation_gi=222356022:source_db_xref=taxon_31140:genus=Conolophus:name=FJ535922.1_f0:annotation_accessions=_'FJ535922'_:source_feature_id=FJ535922.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_collection_date=24-May-2003:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:source_country=Ecuador_ Plaza Sur_ Galapagos:annotation_sequence_version=1])0:2.72838e-06[&&NHX:support=0.0:dist=2.72837743499e-06:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],FJ535918.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'An overlooked pink species of land iguana in the Galapagos'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=07-FEB-2009:source_mol_type=genomic DNA:annotation_organism=Conolophus subcristatus:source_collected_by=S. Rosa and M. Milinkovitch:prot_degen_prop=0:source_isolate=PZS2:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=FJ535918.1_f0:db_xref=GI_222356015:record_id=FJ535918.1:GC_content=45.5525606469:protein_id=ACM48634.1:product=cytochrome b:source_organism=Conolophus subcristatus:OTUs=PZS2:annotation_data_file_division=VRT:translation=ILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHICRDVQYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFMIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:annotation_keywords=_''_:annotation_gi=222356014:source_db_xref=taxon_31140:genus=Conolophus:name=FJ535918.1_f0:annotation_accessions=_'FJ535918'_:source_feature_id=FJ535918.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_collection_date=24-May-2003:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:source_country=Ecuador_ Plaza Sur_ Galapagos:annotation_sequence_version=1])0:2.72838e-06[&&NHX:support=0.0:dist=2.72837743499e-06:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout])0:2.72838e-06[&&NHX:support=0.0:dist=2.72837743499e-06:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],FJ535916.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'An overlooked pink species of land iguana in the Galapagos'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=07-FEB-2009:source_mol_type=genomic DNA:annotation_organism=Conolophus subcristatus:source_collected_by=S. Rosa and M. Milinkovitch:prot_degen_prop=0:source_isolate=PZS1:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=FJ535916.1_f0:db_xref=GI_222356011:record_id=FJ535916.1:GC_content=45.5525606469:protein_id=ACM48632.1:product=cytochrome b:source_organism=Conolophus subcristatus:OTUs=PZS1:annotation_data_file_division=VRT:translation=ILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHICRDVQYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFMIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:annotation_keywords=_''_:annotation_gi=222356010:source_db_xref=taxon_31140:genus=Conolophus:name=FJ535916.1_f0:annotation_accessions=_'FJ535916'_:source_feature_id=FJ535916.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_collection_date=24-May-2003:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:source_country=Ecuador_ Plaza Sur_ Galapagos:annotation_sequence_version=1])0:2.72838e-06[&&NHX:support=0.0:dist=2.72837743499e-06:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],FJ535920.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'An overlooked pink species of land iguana in the Galapagos'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=07-FEB-2009:source_mol_type=genomic DNA:annotation_organism=Conolophus subcristatus:source_collected_by=S. Rosa and M. 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Rassmann et al.:prot_degen_prop=0:source_isolate=LBJ1:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=FJ535890.1_f0:db_xref=GI_222355959:record_id=FJ535890.1:GC_content=45.6424079066:protein_id=ACM48606.1:product=cytochrome b:source_organism=Conolophus subcristatus:OTUs=LBJ1:annotation_data_file_division=VRT:translation=ILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHICRDVQYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFVIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:annotation_keywords=_''_:annotation_gi=222355958:source_db_xref=taxon_31140:genus=Conolophus:name=FJ535890.1_f0:annotation_accessions=_'FJ535890'_:source_feature_id=FJ535890.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_collection_date=30-Mar-1997:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:source_country=Ecuador_ Baltra_ Galapagos:annotation_sequence_version=1])0:2.72838e-06[&&NHX:support=0.0:dist=2.72837743499e-06:name=NoName:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout],FJ535864.1_f0:2.72838e-06[&&NHX:dist=2.72837743499e-06:tree_method_id=571221413667810.4_cytb@MafftLinsi@gappyout:annotation_references=_Reference_title_'An overlooked pink species of land iguana in the Galapagos'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=07-FEB-2009:source_mol_type=genomic DNA:annotation_organism=Conolophus subcristatus:source_collected_by=G. Gentile:prot_degen_prop=0:source_isolate=BL17:support=1.0:codon_start=1:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=FJ535864.1_f0:db_xref=GI_222355907:record_id=FJ535864.1:GC_content=45.6424079066:protein_id=ACM48580.1:product=cytochrome b:source_organism=Conolophus subcristatus:OTUs=BL17:annotation_data_file_division=VRT:translation=ILKIINNSFIDLPTPSNISAWWNFGSLLGLCLIIQIMTGLFLAMHYTADISSAFSSIAHICRDVQYGWLIRSLHANGASMFFICLYLHIGRGLYYGSYLFKETWNLGVILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDNATLTRFFTFHFLLPFVIIGVTLLHLLFLHETGSNNPTGLNSNPDKIPFHPYYSYKDLLGAILMIIALLSLTLFSPNLLTDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMIIPLLHLSKQRTNTFRPFSQTLFWLLVSNVLILTWIGGQPVEHPFIIIGQLASASYFLLFLMIMPITALLENKLLNW:annotation_keywords=_''_:annotation_gi=222355906:source_db_xref=taxon_31140:genus=Conolophus:source_sex=female:name=FJ535864.1_f0:annotation_accessions=_'FJ535864'_:source_feature_id=FJ535864.1_source:transl_table=2:annotation_source=mitochondrion Conolophus subcristatus:source_collection_date=25-Jul-2005:source_tissue_type=blood:gene=cytb:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Conolophus'_:source_country=Ecuador_ Baltra_ Galapagos:annotation_sequence_version=1]);
coiii
Alignment method: MafftLinsi
Trimming method: gappyout
Tree method: fD_fb
Tree Method ID: 571221413667810.4_coiii@MafftLinsi@gappyout
newick format
((HQ141197.1_f0:4.22327e-06,(HQ141193.1_f0:0.00316875,(HQ141194.1_f0:0.00626536,(HQ141195.1_f0:4.22327e-06,HQ141196.1_f0:4.22327e-06)100:0.00154385)57:4.22327e-06)70:0.00312371)100:0.111213,((HQ141186.1_f0:0.00204035,((HQ141211.1_f0:0.0032592,(HQ141222.1_f0:4.22327e-06,HQ141221.1_f0:4.22327e-06)51:0.00322456)51:0.00324867,(HQ141215.1_f0:0.00321156,(HQ141218.1_f0:0.00160178,((HQ141212.1_f0:4.22327e-06,HQ141213.1_f0:4.22327e-06)100:0.00161312,(HQ141216.1_f0:0.00160584,(HQ141214.1_f0:4.22327e-06,HQ141217.1_f0:4.22327e-06)94:0.00320227)94:4.22327e-06)94:0.00485355)42:4.22327e-06)92:4.22327e-06)45:0.00773235)100:0.124249,(((HQ141210.1_f0:4.22327e-06,HQ141207.1_f0:4.22327e-06)100:0.00156421,(HQ141209.1_f0:4.22327e-06,((HQ141208.1_f0:4.22327e-06,(HQ141205.1_f0:4.22327e-06,HQ141206.1_f0:4.22327e-06)0:4.22327e-06)97:4.22327e-06,(HQ141204.1_f0:4.22327e-06,(HQ141219.1_f0:0.00317847,((HQ141229.1_f0:4.22327e-06,HQ141228.1_f0:4.22327e-06)100:4.22327e-06,(HQ141224.1_f0:4.22327e-06,(HQ141223.1_f0:4.22327e-06,HQ141225.1_f0:4.22327e-06)89:4.22327e-06)100:4.22327e-06)100:0.00316845)100:0.00477421)100:4.22327e-06)100:4.22327e-06)100:4.22327e-06)100:0.0208917,((HQ141192.1_f0:4.22327e-06,(HQ141227.1_f0:4.22327e-06,HQ141226.1_f0:4.22327e-06)100:0.00168701)100:0.00350203,(((HQ141198.1_f0:4.22327e-06,HQ141199.1_f0:4.22327e-06)0:4.22327e-06,(HQ141200.1_f0:4.22327e-06,(HQ141201.1_f0:4.22327e-06,(HQ141203.1_f0:4.22327e-06,HQ141202.1_f0:4.22327e-06)5:4.22327e-06)0:4.22327e-06)0:4.22327e-06)81:0.00303345,((HQ141220.1_f0:0.00156751,HQ141183.1_f0:0.00156395)100:4.22327e-06,((HQ141185.1_f0:0.00476366,HQ141189.1_f0:4.22327e-06)100:0.00157488,((HQ141190.1_f0:4.22327e-06,HQ141191.1_f0:4.22327e-06)0:4.22327e-06,(HQ141188.1_f0:4.22327e-06,(HQ141184.1_f0:4.22327e-06,HQ141187.1_f0:4.22327e-06)3:4.22327e-06)0:4.22327e-06)90:4.22327e-06)82:4.22327e-06)94:0.00330506)78:0.00448957)81:0.0147034)95:0.0277087)100:0.111213);
nhx format
((HQ141223.1_f0:4.22327e-06[&&NHX:dist=4.22326757118e-06:source_sub_species=nolascensis:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38029:annotation_organism=Ctenosaura hemilopha nolascensis:prot_degen_prop=0.0046728972:source_isolate=Ch30:support=1.0:codon_start=2:nuc_degen_prop=0.0015503876:source_organelle=mitochondrion:feature_id=HQ141223.1_f0:db_xref=GI_325311002:record_id=HQ141223.1:GC_content=44.0310077519:protein_id=ADZ11145.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha nolascensis:OTUs=ROM_38029:annotation_data_file_division=VRT:translation=IXALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325311001:source_db_xref=taxon_993012:genus=Ctenosaura:name=HQ141223.1_f0:annotation_accessions=_'HQ141223'_:source_feature_id=HQ141223.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha nolascensis:gene=COIII:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Isla San Pedro Nolasco:annotation_sequence_version=1],HQ141225.1_f0:4.22327e-06[&&NHX:dist=4.22326757118e-06:source_sub_species=nolascensis:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38031:annotation_organism=Ctenosaura hemilopha nolascensis:prot_degen_prop=0:source_isolate=Ch32:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141225.1_f0:db_xref=GI_325311006:record_id=HQ141225.1:GC_content=44.1860465116:protein_id=ADZ11147.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha nolascensis:OTUs=ROM_38031:annotation_data_file_division=VRT:translation=ITALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325311005:source_db_xref=taxon_993012:genus=Ctenosaura:name=HQ141225.1_f0:annotation_accessions=_'HQ141225'_:source_feature_id=HQ141225.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha nolascensis:gene=COIII:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Isla San Pedro Nolasco:annotation_sequence_version=1])89:4.22327e-06[&&NHX:support=89.0:dist=4.22326757118e-06:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout],((HQ141219.1_f0:0.00317847[&&NHX:dist=0.00317846968827:source_sub_species=macrolopha:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38004:annotation_organism=Ctenosaura hemilopha macrolopha:prot_degen_prop=0:source_isolate=Ch19:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141219.1_f0:db_xref=GI_325310994:record_id=HQ141219.1:GC_content=43.8759689922:protein_id=ADZ11141.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha macrolopha:OTUs=ROM_38004:annotation_data_file_division=VRT:translation=ITALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325310993:source_db_xref=taxon_993011:genus=Ctenosaura:name=HQ141219.1_f0:annotation_accessions=_'HQ141219'_:source_feature_id=HQ141219.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha macrolopha:gene=COIII:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Sonora_ Los 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38040:annotation_organism=Ctenosaura pectinata:prot_degen_prop=0:source_isolate=Cp03:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141186.1_f0:db_xref=GI_325310928:record_id=HQ141186.1:GC_content=43.8759689922:protein_id=ADZ11108.1:annotation_keywords=_''_:product=cytochrome c oxidase subunit III:OTUs=ROM_38040:annotation_data_file_division=VRT:translation=IAALLMTSGLAIWFHFNNTALLYLGLIILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFIMSEVFFFLGFFWAFYHSSLAPTPELGGCWPPNGIHPLNPFEVPLLNTAVLLASGVTVTWTHHSIMEGKRKEATQALLLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLTICLIRQIMFHFTTNHHFGF:source_organism=Ctenosaura pectinata:annotation_gi=325310927:source_db_xref=taxon_496808:genus=Ctenosaura:name=HQ141186.1_f0:annotation_accessions=_'HQ141186'_:source_feature_id=HQ141186.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura pectinata:gene=COIII:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Sinaloa:annotation_sequence_version=1],((HQ141211.1_f0:0.0032592[&&NHX:dist=0.00325920438555:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38041:annotation_organism=Ctenosaura pectinata:prot_degen_prop=0.0046728972:source_isolate=Cp04:support=1.0:codon_start=2:nuc_degen_prop=0.0015503876:source_organelle=mitochondrion:feature_id=HQ141211.1_f0:db_xref=GI_325310978:record_id=HQ141211.1:GC_content=43.2558139535:protein_id=ADZ11133.1:annotation_keywords=_''_:product=cytochrome c oxidase subunit 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Mazatlan:annotation_sequence_version=1],(HQ141222.1_f0:4.22327e-06[&&NHX:dist=4.22326757118e-06:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38002:annotation_organism=Ctenosaura pectinata:prot_degen_prop=0:source_isolate=Cp02:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141222.1_f0:db_xref=GI_325311000:record_id=HQ141222.1:GC_content=43.8759689922:protein_id=ADZ11144.1:annotation_keywords=_''_:product=cytochrome c oxidase subunit III:OTUs=ROM_38002:annotation_data_file_division=VRT:translation=IAALLMTSGLAIWFHFNNTTLLYLGLIILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFIMSEVFFFLGFFWAFYHSSLAPTPELGGCWPPNGIHPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKEATQALLLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLTICLIRQIMFHFTTNHHFGF:source_organism=Ctenosaura pectinata:annotation_gi=325310999:source_db_xref=taxon_496808:genus=Ctenosaura:name=HQ141222.1_f0:annotation_accessions=_'HQ141222'_:source_feature_id=HQ141222.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura pectinata:gene=COIII:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Sonora_ Navolato:annotation_sequence_version=1],HQ141221.1_f0:4.22327e-06[&&NHX:dist=4.22326757118e-06:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38001:annotation_organism=Ctenosaura pectinata:prot_degen_prop=0:source_isolate=Cp01:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141221.1_f0:db_xref=GI_325310998:record_id=HQ141221.1:GC_content=43.8759689922:protein_id=ADZ11143.1:annotation_keywords=_''_:product=cytochrome c oxidase subunit 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Culiacan:annotation_sequence_version=1])51:0.00322456[&&NHX:support=51.0:dist=0.00322456253108:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])51:0.00324867[&&NHX:support=51.0:dist=0.00324866774771:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout],(HQ141215.1_f0:0.00321156[&&NHX:dist=0.00321155628835:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38045:annotation_organism=Ctenosaura 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Mazatlan:annotation_sequence_version=1])94:0.00320227[&&NHX:support=94.0:dist=0.00320227215368:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout],HQ141216.1_f0:0.00160584[&&NHX:dist=0.00160583720771:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38046:annotation_organism=Ctenosaura pectinata:prot_degen_prop=0:source_isolate=Cp09:support=1.0:codon_start=2:nuc_degen_prop=0.0015503876:source_organelle=mitochondrion:feature_id=HQ141216.1_f0:db_xref=GI_325310988:record_id=HQ141216.1:GC_content=43.2558139535:protein_id=ADZ11138.1:annotation_keywords=_''_:product=cytochrome c oxidase subunit 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Mazatlan:annotation_sequence_version=1])94:4.22327e-06[&&NHX:support=94.0:dist=4.22326757118e-06:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])94:0.00485355[&&NHX:support=94.0:dist=0.00485354714549:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout],HQ141218.1_f0:0.00160178[&&NHX:dist=0.001601782862:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38050:annotation_organism=Ctenosaura pectinata:prot_degen_prop=0:source_isolate=Cp11:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141218.1_f0:db_xref=GI_325310992:record_id=HQ141218.1:GC_content=43.4108527132:protein_id=ADZ11140.1:annotation_keywords=_''_:product=cytochrome c oxidase subunit III:OTUs=ROM_38050:annotation_data_file_division=VRT:translation=ITALLMTSGLAIWFHFNNTTLLYLGLIILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFIMSEVFFFLGFFWAFYHSSLAPTPELGGCWPPNGIHPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKEATQALLLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLTICLIRQIMFHFTTNHHFGF:source_organism=Ctenosaura pectinata:annotation_gi=325310991:source_db_xref=taxon_496808:genus=Ctenosaura:name=HQ141218.1_f0:annotation_accessions=_'HQ141218'_:source_feature_id=HQ141218.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura pectinata:gene=COIII:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Sinaloa_ near Chametla:annotation_sequence_version=1])42:4.22327e-06[&&NHX:support=42.0:dist=4.22326757118e-06:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])92:4.22327e-06[&&NHX:support=92.0:dist=4.22326757118e-06:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])45:0.00773235[&&NHX:support=45.0:dist=0.00773235001265:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])100:0.124249[&&NHX:support=100.0:dist=0.12424875893:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])95:0.0277087[&&NHX:support=95.0:dist=0.027708718426:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])100:0.0208917[&&NHX:support=100.0:dist=0.0208917495461:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])100:4.22327e-06[&&NHX:support=100.0:dist=4.22326757118e-06:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])100:4.22327e-06[&&NHX:support=100.0:dist=4.22326757118e-06:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])100:4.22327e-06[&&NHX:support=100.0:dist=4.22326757118e-06:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])100:0.00477421[&&NHX:support=100.0:dist=0.00477420759364:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])100:0.00316845[&&NHX:support=100.0:dist=0.00316844847435:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout],(HQ141229.1_f0:4.22327e-06[&&NHX:dist=4.22326757118e-06:source_sub_species=nolascensis:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38035:annotation_organism=Ctenosaura hemilopha nolascensis:prot_degen_prop=0.0046728972:source_isolate=Ch36:support=1.0:codon_start=2:nuc_degen_prop=0.0015503876:source_organelle=mitochondrion:feature_id=HQ141229.1_f0:db_xref=GI_325311014:record_id=HQ141229.1:GC_content=44.1860465116:protein_id=ADZ11151.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha nolascensis:OTUs=ROM_38035:annotation_data_file_division=VRT:translation=IXALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325311013:source_db_xref=taxon_993012:genus=Ctenosaura:name=HQ141229.1_f0:annotation_accessions=_'HQ141229'_:source_feature_id=HQ141229.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha nolascensis:gene=COIII:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Isla San Pedro Nolasco:annotation_sequence_version=1],HQ141228.1_f0:4.22327e-06[&&NHX:dist=4.22326757118e-06:source_sub_species=nolascensis:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38034:annotation_organism=Ctenosaura hemilopha nolascensis:prot_degen_prop=0.0046728972:source_isolate=Ch35:support=1.0:codon_start=2:nuc_degen_prop=0.0015503876:source_organelle=mitochondrion:feature_id=HQ141228.1_f0:db_xref=GI_325311012:record_id=HQ141228.1:GC_content=44.1860465116:protein_id=ADZ11150.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha nolascensis:OTUs=ROM_38034:annotation_data_file_division=VRT:translation=IXALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325311011:source_db_xref=taxon_993012:genus=Ctenosaura:name=HQ141228.1_f0:annotation_accessions=_'HQ141228'_:source_feature_id=HQ141228.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha nolascensis:gene=COIII:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Isla San Pedro Nolasco:annotation_sequence_version=1])100:4.22327e-06[&&NHX:support=100.0:dist=4.22326757118e-06:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout])100:4.22327e-06[&&NHX:support=100.0:dist=4.22326757118e-06:name=NoName:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout],HQ141224.1_f0:4.22327e-06[&&NHX:dist=4.22326757118e-06:source_sub_species=nolascensis:tree_method_id=571221413667810.4_coiii@MafftLinsi@gappyout:annotation_references=_Reference_title_'Seri Indian traditional knowledge and molecular biology agree_ no express train for island-hopping spiny-tailed iguanas in the Sea of Cortes'_ ...__ Reference_title_'Direct Submission'_ ...__:annotation_date=12-MAR-2011:source_mol_type=genomic DNA:source_specimen_voucher=ROM 38030:annotation_organism=Ctenosaura hemilopha nolascensis:prot_degen_prop=0:source_isolate=Ch31:support=1.0:codon_start=2:nuc_degen_prop=0:source_organelle=mitochondrion:feature_id=HQ141224.1_f0:db_xref=GI_325311004:record_id=HQ141224.1:GC_content=44.1860465116:protein_id=ADZ11146.1:product=cytochrome c oxidase subunit III:source_organism=Ctenosaura hemilopha nolascensis:OTUs=ROM_38030:annotation_data_file_division=VRT:translation=ITALLMTSGLAIWFHFNNTALLYLGLTILLLTMYQWWRDIVREGTFQGHHTTLVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLAPTPELGGCWPPNGIRPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKETTQALFLTIILGLYFTALQAMEYYEAPFTISDSVYGTTFFVATGFHGLHVIIGSSFLIICLIRQIMFHFTTTHHFGF:annotation_keywords=_''_:annotation_gi=325311003:source_db_xref=taxon_993012:genus=Ctenosaura:name=HQ141224.1_f0:annotation_accessions=_'HQ141224'_:source_feature_id=HQ141224.1_source:transl_table=2:annotation_source=mitochondrion Ctenosaura hemilopha nolascensis:gene=COIII:annotation_taxonomy=_'Eukaryota'_ 'Metazoa'_ 'Chordata'_ 'Craniata'_ 'Vertebrata'_ 'Euteleostomi'_ 'Lepidosauria'_ 'Squamata'_ 'Bifurcata'_ 'Unidentata'_ 'Episquamata'_ 'Toxicofera'_ 'Iguania'_ 'Iguanidae'_ 'Iguaninae'_ 'Ctenosaura'_:source_country=Mexico_ Isla San Pedro Nolasco:annotation_sequence_version=1]);
